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  • TomNicholas · 7 ✖

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  • Automatic duck array testing - reductions · 7 ✖

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id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
1216662525 https://github.com/pydata/xarray/pull/4972#issuecomment-1216662525 https://api.github.com/repos/pydata/xarray/issues/4972 IC_kwDOAMm_X85IhMv9 TomNicholas 35968931 2022-08-16T13:47:05Z 2022-08-16T13:47:05Z MEMBER

if we can get the strategies from https://github.com/pydata/xarray/pull/6908 to shrink well

I think they already do shrink well. Each of them has corresponding unit tests, and none of those tests fail due to hypothesis timeouts.

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  Automatic duck array testing - reductions 818059250
1212138021 https://github.com/pydata/xarray/pull/4972#issuecomment-1212138021 https://api.github.com/repos/pydata/xarray/issues/4972 IC_kwDOAMm_X85IP8Il TomNicholas 35968931 2022-08-11T15:21:17Z 2022-08-11T15:21:17Z MEMBER

I also agree that both the strategies as well as the base classes should eventually live in xarray.testing, but I'd probably keep them in xarray.tests for now (just so we can experiment a bit more).

So I may actually have overexcitedly already jumped the gun and made a PR to move strategies to xarray.testing.strategies last night :sweat_smile: #6908 We might just want to wait to merge this before merging that though anyway.

Note, however, that it's probably best not to separate 2 and 3 because there might be issues with the base class design we don't notice without trying to actually use them.

Good point.

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  Automatic duck array testing - reductions 818059250
1211580601 https://github.com/pydata/xarray/pull/4972#issuecomment-1211580601 https://api.github.com/repos/pydata/xarray/issues/4972 IC_kwDOAMm_X85IN0C5 TomNicholas 35968931 2022-08-11T06:00:29Z 2022-08-11T06:00:29Z MEMBER

Q: Shouldn't the base classes live in xarray.testing rather than xarray.tests?

Another Q on a similar note: Are we planning to eventually publicly expose the (awesome btw) strategies that you've built here @keewis ? They could be very useful for testing other parts of xarray.

We could also make this PR much more incremental by splitting it into 2, or even 3 separate PRs: 1) strategies, to live somewhere like xarray.testing.strategies and eventually be made public 2) duck array base classes to inherit from, to live somewhere like xarray.testing.duckarrays 3) specific tests for pint/sparse, to live in our own test suite for now but moved out eventually.

The advantage of that would be that (1) & (2) can move forwards without requiring all the tests in (3) to pass.

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  Automatic duck array testing - reductions 818059250
1209719906 https://github.com/pydata/xarray/pull/4972#issuecomment-1209719906 https://api.github.com/repos/pydata/xarray/issues/4972 IC_kwDOAMm_X85IGtxi TomNicholas 35968931 2022-08-09T18:20:25Z 2022-08-09T18:22:35Z MEMBER

Q: Shouldn't the base classes live in xarray.testing rather than xarray.tests?

Then the test_units.py and test_sparse.py live in xarray.tests (until they eventually get moved to another repo), but import the base classes from xarray.tests?

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  Automatic duck array testing - reductions 818059250
1208462500 https://github.com/pydata/xarray/pull/4972#issuecomment-1208462500 https://api.github.com/repos/pydata/xarray/issues/4972 IC_kwDOAMm_X85IB6yk TomNicholas 35968931 2022-08-08T18:26:33Z 2022-08-08T18:26:33Z MEMBER

See https://github.com/pydata/xarray/issues/6894 for general discussion of the general plans

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  Automatic duck array testing - reductions 818059250
1208311997 https://github.com/pydata/xarray/pull/4972#issuecomment-1208311997 https://api.github.com/repos/pydata/xarray/issues/4972 IC_kwDOAMm_X85IBWC9 TomNicholas 35968931 2022-08-08T16:00:01Z 2022-08-08T16:00:01Z MEMBER

I'm watching the progress of this PR with bated breath! I literally want to be able to test 3 different array libraries right now: pint, cubed, and awkward. :exploding_head:

Thinking about the complexity of testing like this in general I have a bunch of follow-up questions for future PRs though, e.g:

1) Shouldn't we start with some very simple tests that first check if the correct properties are defined on the wrapped array class, i.e. shape, dtype etc? 2) What's the easiest way to expose a framework of tests like this to the user, so they can import them and run them on any duck array type? 3) Docs on how to use these public tests? 4) Can we possibly allow the user to run tests on data they created? I'm thinking in particular of creating ragged awkward arrays and then testing reduce etc. on them.

Should I therefore make a separate issue to specifically track how we test (and expose test frameworks for) duck array wrapping? (So we can discuss these questions there?)

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  Automatic duck array testing - reductions 818059250
1188483366 https://github.com/pydata/xarray/pull/4972#issuecomment-1188483366 https://api.github.com/repos/pydata/xarray/issues/4972 IC_kwDOAMm_X85G1tEm TomNicholas 35968931 2022-07-19T01:03:23Z 2022-07-19T01:03:23Z MEMBER

Can we xfail these new tests and merge for now? As long as tests/test_sparse.py still passes, there are no issues, correct?

Yeah we now have another array type to consider testing, so I'm also in favour of merging now with passing tests for pint, and un-xfailing tests for other array types (i.e. sparse) in a later PR.

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  Automatic duck array testing - reductions 818059250

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