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- N-dimensional boolean indexing · 6 ✖
id | html_url | issue_url | node_id | user | created_at | updated_at ▲ | author_association | body | reactions | performed_via_github_app | issue |
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844486483 | https://github.com/pydata/xarray/issues/5179#issuecomment-844486483 | https://api.github.com/repos/pydata/xarray/issues/5179 | MDEyOklzc3VlQ29tbWVudDg0NDQ4NjQ4Mw== | Hoeze 1200058 | 2021-05-19T21:27:17Z | 2021-05-19T21:27:17Z | NONE | fyi, I updated the boolean indexing to support additional or missing dimensions: https://gist.github.com/Hoeze/96616ef9d179180b0b7de97c97e00a27 I'm using this on a 4D-array with >300GB to flatten three of the four dimensions and it works, even on 64GB of RAM. |
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824505721 | https://github.com/pydata/xarray/issues/5179#issuecomment-824505721 | https://api.github.com/repos/pydata/xarray/issues/5179 | MDEyOklzc3VlQ29tbWVudDgyNDUwNTcyMQ== | shoyer 1217238 | 2021-04-22T03:11:21Z | 2021-04-22T03:11:21Z | MEMBER | @max-sixty and I have been having some more discussion about whether this is what But regardless of what we want boolean indexing with |
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823674011 | https://github.com/pydata/xarray/issues/5179#issuecomment-823674011 | https://api.github.com/repos/pydata/xarray/issues/5179 | MDEyOklzc3VlQ29tbWVudDgyMzY3NDAxMQ== | shoyer 1217238 | 2021-04-20T23:51:46Z | 2021-04-20T23:51:46Z | MEMBER | I wonder if this is just a better proposal than making N-dimensional boolean indexing an alias for |
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821888349 | https://github.com/pydata/xarray/issues/5179#issuecomment-821888349 | https://api.github.com/repos/pydata/xarray/issues/5179 | MDEyOklzc3VlQ29tbWVudDgyMTg4ODM0OQ== | max-sixty 5635139 | 2021-04-17T21:12:11Z | 2021-04-17T21:12:11Z | MEMBER | Ah right, I see now, thanks for explaining. Allowing pointwise indexing with bool indexes would also be welcome. |
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821881984 | https://github.com/pydata/xarray/issues/5179#issuecomment-821881984 | https://api.github.com/repos/pydata/xarray/issues/5179 | MDEyOklzc3VlQ29tbWVudDgyMTg4MTk4NA== | Hoeze 1200058 | 2021-04-17T20:22:13Z | 2021-04-17T20:27:25Z | NONE | @max-sixty The reason is that my method is basically a special case of point-wise indexing: http://xarray.pydata.org/en/stable/indexing.html#more-advanced-indexing You can get the same result by calling: ```python core_dim_locs = {key: value for key, value in core_dim_locs_from_cond(mask, new_dim_name="newdim")} pointwise selectiondata.sel( dim_0=outliers_subset["dim_0"], dim_1=outliers_subset["dim_1"], dim_2=outliers_subset["dim_2"] ) ``` (Note that you loose chunk information by this method, that's why it is less efficient) When you want to select random items from a N-dimensional array, you can either model the result as some sparse array or by stacking the dimensions. (OK, stacking the dimensions means also a sparse COO encoding...) |
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821870239 | https://github.com/pydata/xarray/issues/5179#issuecomment-821870239 | https://api.github.com/repos/pydata/xarray/issues/5179 | MDEyOklzc3VlQ29tbWVudDgyMTg3MDIzOQ== | max-sixty 5635139 | 2021-04-17T18:53:05Z | 2021-04-17T18:53:05Z | MEMBER | Thanks for the issue @Hoeze . Multi-dimensional bool indexing is definitely something we'd like to add. How does your code differ from the proposals in https://github.com/pydata/xarray/issues/1887? In a brief look through the code — thanks for supplying it — I couldn't immediately see why we need a new dimension? |
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