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- Multidimensional groupby · 7 ✖
id | html_url | issue_url | node_id | user | created_at | updated_at ▲ | author_association | body | reactions | performed_via_github_app | issue |
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220861371 | https://github.com/pydata/xarray/pull/818#issuecomment-220861371 | https://api.github.com/repos/pydata/xarray/issues/818 | MDEyOklzc3VlQ29tbWVudDIyMDg2MTM3MQ== | jhamman 2443309 | 2016-05-22T22:47:39Z | 2016-05-22T22:47:39Z | MEMBER | @rabernat - I'm a bit late to the party here but it looks like you have gotten it straightened out. I would have suggested plotting the projected data using @clarkfitzg - this is the exact functionality we want with 2d plot coordinates and we definitely do not want to change it. It is a little annoying that |
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Multidimensional groupby 146182176 | |
220144452 | https://github.com/pydata/xarray/pull/818#issuecomment-220144452 | https://api.github.com/repos/pydata/xarray/issues/818 | MDEyOklzc3VlQ29tbWVudDIyMDE0NDQ1Mg== | jhamman 2443309 | 2016-05-18T20:15:04Z | 2016-05-18T20:15:04Z | MEMBER | @rabernat - the |
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Multidimensional groupby 146182176 | |
219875456 | https://github.com/pydata/xarray/pull/818#issuecomment-219875456 | https://api.github.com/repos/pydata/xarray/issues/818 | MDEyOklzc3VlQ29tbWVudDIxOTg3NTQ1Ng== | jhamman 2443309 | 2016-05-17T22:38:56Z | 2016-05-17T22:38:56Z | MEMBER | @rabernat - I just had a look through the code and it looks pretty good. I have a few broader questions though: 1. You have a few outstanding todo items from the first comment in your PR:
Where do we stand on these? You have some simple examples in the docs now but maybe you were thinking of more complete examples? 2. In https://github.com/pydata/xarray/pull/818#issuecomment-218358050, I ran into the index is monotonic issue, it sounds like that was resolved. Do we cover that case in a test? |
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Multidimensional groupby 146182176 | |
218510748 | https://github.com/pydata/xarray/pull/818#issuecomment-218510748 | https://api.github.com/repos/pydata/xarray/issues/818 | MDEyOklzc3VlQ29tbWVudDIxODUxMDc0OA== | jhamman 2443309 | 2016-05-11T16:18:05Z | 2016-05-11T16:18:05Z | MEMBER | @rabernat - See link to 2d slice with coordinates below: sample_for_xarray_multigroupby.nc.zip As for the TODO, I see now that it was there before and I agree that we should be able to side step the sorted requirement. |
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Multidimensional groupby 146182176 | |
218358050 | https://github.com/pydata/xarray/pull/818#issuecomment-218358050 | https://api.github.com/repos/pydata/xarray/issues/818 | MDEyOklzc3VlQ29tbWVudDIxODM1ODA1MA== | jhamman 2443309 | 2016-05-11T04:21:16Z | 2016-05-11T04:21:16Z | MEMBER | @rabernat - Sorry this took so long. Comments as I play around with the new feature...
1. I was getting some strange memory errors when trying this multidimensional groupbyon a large 4d ocean dataset (nlat: 720, nlon: 1280, time: 424, z_t: 45). my IPython Kernel just kept dying. Command was ``` pytb ----> 1 da.groupby('TLAT', bins=[50, 60, 70, 80, 90]) /Users/jhamman/Dropbox/src/xarray/xarray/core/common.py in groupby(self, group, squeeze, bins) 352 if isinstance(group, basestring): 353 group = self[group] --> 354 return self.groupby_cls(self, group, squeeze=squeeze, bins=bins) 355 356 def rolling(self, min_periods=None, center=False, **windows): /Users/jhamman/Dropbox/src/xarray/xarray/core/groupby.py in init(self, obj, group, squeeze, grouper, bins) 141 if not index.is_monotonic: 142 # TODO: sort instead of raising an error --> 143 raise ValueError('index must be monotonic for resampling') 144 s = pd.Series(np.arange(index.size), index) 145 if grouper is not None: ValueError: index must be monotonic for resampling ``` It seems this is only an issue when I specify Based on the datasets I have handy right now, I think number 2 in my list is a show show stopper so I think we want to make sure that feature makes it into this PR. |
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Multidimensional groupby 146182176 | |
208631007 | https://github.com/pydata/xarray/pull/818#issuecomment-208631007 | https://api.github.com/repos/pydata/xarray/issues/818 | MDEyOklzc3VlQ29tbWVudDIwODYzMTAwNw== | jhamman 2443309 | 2016-04-12T00:08:27Z | 2016-04-12T00:08:27Z | MEMBER | This looks really promising. I've gone through the code for the first time and had just a few comments. I'll pull your branch down and give it a test drive on some real data. |
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Multidimensional groupby 146182176 | |
206468443 | https://github.com/pydata/xarray/pull/818#issuecomment-206468443 | https://api.github.com/repos/pydata/xarray/issues/818 | MDEyOklzc3VlQ29tbWVudDIwNjQ2ODQ0Mw== | jhamman 2443309 | 2016-04-06T17:09:31Z | 2016-04-06T17:09:31Z | MEMBER | @rabernat - I don't have much to add right now but I've very excited about this addition. Once you've filled in few more of the features, ping me and I'll give it a full review and will test it out in some applications we have in house. |
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