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id ▼ node_id number state locked title user body created_at updated_at closed_at merged_at merge_commit_sha assignee milestone draft head base author_association auto_merge repo url merged_by
50391159 MDExOlB1bGxSZXF1ZXN0NTAzOTExNTk= 655 closed 0 More control on cmap params fmaussion 10050469 **Motivation:** https://github.com/xray/xray/issues/642 User's `vmin`, `vmax` are no longer overwritten. You can prevent divergent cmaps and keep automatic vmin, vmax bei setting `center=False`. This is quite intuitive I think (first thing I tried when I wanted to avoid a divergent colormap). See the new tests for examples of use. 2015-11-11T14:51:10Z 2015-11-15T22:20:04Z 2015-11-15T22:19:05Z 2015-11-15T22:19:05Z a9b1b821c1a6fdce709cc66fe1c520be5a041ceb     0 9bf93f79194ecfd512b6e947f39e91c654d7f205 5109f4f7bcb08c03ba006d42bed906ff0d194a29 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/655  
61156349 MDExOlB1bGxSZXF1ZXN0NjExNTYzNDk= 778 closed 0 fix value error in data-structures doc fmaussion 10050469 This should fix the error in the docs here: http://xarray.pydata.org/en/latest/data-structures.html It is a detail, but it occurred to me that the examples of this section don't use the (space, time) dimension order (e.g. `dims=['time', 'space']`). Most of the climate datasets I know of are using the numpy (lat, lon, time) dim order. Is it intentional? 2016-02-29T22:21:58Z 2016-03-01T00:50:27Z 2016-03-01T00:50:27Z 2016-03-01T00:50:27Z 2661aa20e745b14291d55c0b9d7e60720ce434b3     0 b8eaa7cbf6e9fc24e0b80a13301ab81baf60d303 b15f0ee759248ef52b9a53d410090133b86216ee MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/778  
62641492 MDExOlB1bGxSZXF1ZXN0NjI2NDE0OTI= 794 closed 0 fix: transpose non-linked coordinates in 2d plots fmaussion 10050469 Should fix https://github.com/pydata/xarray/issues/788 2016-03-12T13:32:59Z 2016-03-13T20:06:02Z 2016-03-13T20:06:02Z 2016-03-13T20:06:02Z ec94594de16bbdb6b228718fb36d94872973b4ef     0 83dd5a2bd307071769700d6eae2d1c263bd1c561 f905289ea750637f655ac6ad659a859bca575ea5 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/794  
72539305 MDExOlB1bGxSZXF1ZXN0NzI1MzkzMDU= 868 closed 0 BUG: contour plot levels fmaussion 10050469 This should fix https://github.com/pydata/xarray/issues/866 2016-06-03T17:10:09Z 2016-07-20T17:16:28Z 2016-07-20T17:16:27Z 2016-07-20T17:16:27Z 884b247742af2480e269bb54c9102f08c867fdaa     0 ff721b6f48ce1d5f35d3f167f766f327d281e223 745d976e0bc676342e7e4354f45846fc101c02de MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/868  
72627551 MDExOlB1bGxSZXF1ZXN0NzI2Mjc1NTE= 870 closed 0 DOC: mention conda-forge fmaussion 10050469 Follow-up on https://github.com/pydata/xarray/issues/869#issuecomment-223776182 I am no native speaker, so feel free to change everything. 2016-06-05T11:59:45Z 2016-06-06T20:13:54Z 2016-06-06T20:13:49Z 2016-06-06T20:13:49Z 2448b5b3fa3647419df8f14d60f1c32b9d002af7     0 b5597fa4374ac30b02b810ae8e8570e773878e6d 80abe5dede7bf8a2949139f8ba083a6d74d4e3db MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/870  
72860302 MDExOlB1bGxSZXF1ZXN0NzI4NjAzMDI= 872 closed 0 ENH: more control on colorbar fmaussion 10050469 Addresses https://github.com/pydata/xarray/issues/752 and allows to pass kwargs to colorbar. For example, it is now possible to do: ``` python import numpy as np import matplotlib.pyplot as plt import xarray as xr x, y = np.meshgrid(np.arange(12), np.arange(12)) z = xr.DataArray(np.sqrt(x**2 + y**2)) ds = z.to_dataset(name='z') fig, ((ax1, ax2), (ax3, ax4)) = plt.subplots(2, 2, figsize=(12, 12)) ds.z.plot.contourf(ax=ax1) ds.z.plot.contourf(ax=ax2, cbar_kwargs={'orientation':'horizontal', 'label':'MyLabel'}) ds.z.plot.contourf(ax=ax3, cbar_ax=ax4, cbar_kwargs={'orientation':'horizontal', 'label':'Funny Cbar', 'drawedges':True}) plt.tight_layout() plt.show() ``` ![test_cbar](https://cloud.githubusercontent.com/assets/10050469/15856312/f6eb5a04-2cb4-11e6-81b7-a5420b5c8653.png) 2016-06-07T11:44:52Z 2017-08-10T15:49:55Z 2016-06-09T15:52:46Z 2016-06-09T15:52:46Z 450ac8fb16bec935a18ff3155673dff82208d3fe     0 dc1e3fab1fccae0085641a7bd181d7615c87d3f1 2448b5b3fa3647419df8f14d60f1c32b9d002af7 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/872  
86017826 MDExOlB1bGxSZXF1ZXN0ODYwMTc4MjY= 1011 closed 0 .where() and .fillna() should preserve attributes fmaussion 10050469 Fixes https://github.com/pydata/xarray/issues/1009 There is probably a more elegant way to do it, but the internals of xarray still confuse me. I'm happy to learn! 2016-09-20T17:11:21Z 2016-09-21T17:46:28Z 2016-09-21T17:26:32Z 2016-09-21T17:26:32Z c1eddafdee4477099979bc97b22a9c7fe014b793     0 37c8f37ddc7d1533433ffa81aa0d59ac2dc09dbe 8ef9aad62760bdca038a32ead22941e76f1e507b MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1011  
86018748 MDExOlB1bGxSZXF1ZXN0ODYwMTg3NDg= 1012 closed 0 mini improvement of the install doc fmaussion 10050469 cyordereddict is now obsolete 2016-09-20T17:17:14Z 2016-09-21T17:46:43Z 2016-09-20T17:18:39Z 2016-09-20T17:18:39Z 8ef9aad62760bdca038a32ead22941e76f1e507b     0 1106198e88052534f617eb06db5b54ab79bb1673 551a7bca7b42a6d6db976b01d2eee1131735785d MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1012  
89487607 MDExOlB1bGxSZXF1ZXN0ODk0ODc2MDc= 1048 closed 0 WIP: preserve variables order in Dataset.concat() fmaussion 10050469 addresses https://github.com/pydata/xarray/issues/1042 The problem is that sets aren't ordered. I tried something based on an OrderedSet recipe, but I'm not sure that this is the most elegant way to go. A remaining issue is that the coord variable is still not in place (`['t', 'a', 'b', 'c']` becomes `['a', 'b', 'c', 't']`), but I'm not sure it's possible to do it better (it happens [here](https://github.com/pydata/xarray/blob/master/xarray/core/combine.py#L273-L274)). Any idea welcome 2016-10-15T09:27:53Z 2016-10-15T22:50:16Z 2016-10-15T22:50:16Z   0d084329c676b74409a9f529feec70c2ad9966cd     0 a46c205fe21310d3ff0e81550100e79a0ac5040b 62a7f2c00caacb5b917ff320e28aca9cb4396649 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1048  
89498325 MDExOlB1bGxSZXF1ZXN0ODk0OTgzMjU= 1049 closed 0 Preserve variables order in Dataset.concat() fmaussion 10050469 Alternative (and much easier) implementation to https://github.com/pydata/xarray/pull/1048 The problem with the coordinate variables remains the same 2016-10-15T16:30:32Z 2016-11-02T01:35:53Z 2016-11-02T01:35:53Z 2016-11-02T01:35:53Z a4f5ec2263ee96059f87daec4c217d425ca94e51     0 cea26bb851aacf29c4991407d4c127d92182615d 62a7f2c00caacb5b917ff320e28aca9cb4396649 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1049  
90853585 MDExOlB1bGxSZXF1ZXN0OTA4NTM1ODU= 1060 closed 0 Remove obsolete NetCDF4 Error catch fmaussion 10050469 [edit: this original PR was replaced with another change: "remove obsolete NetCDF4 Error catch"] This allows to give a customized NetCDF4 object to the DataStore. I needed this for Salem's diagnostic variables: https://github.com/fmaussion/salem/blob/master/salem/sio.py#L737-L751 My workaround (a very [shallow](https://github.com/fmaussion/salem/blob/master/salem/sio.py#L653) subclass of NetCDF4DataStore) is fine for me, so I won't be offended if you decide not to merge. On a related issue, the IndexError catch which happens [here](https://github.com/pydata/xarray/blob/master/xarray/backends/netCDF4_.py#L52) is also giving me trouble, since it hides bugs in my code. I know I'm kind of misusing the backend, but I find it very useful the way it is. I'm open to any suggestion to make it more elegant. Thanks! 2016-10-25T17:25:33Z 2017-05-22T08:58:21Z 2017-05-22T08:58:21Z   1ee3bb85cc5489a1df52e17ad690cd992590b8a7     0 f24e8805b77682a21d086c6e28a8041b79c035b2 a4f5ec2263ee96059f87daec4c217d425ca94e51 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1060  
92253877 MDExOlB1bGxSZXF1ZXN0OTIyNTM4Nzc= 1079 closed 0 New infer_intervals keyword for pcolormesh fmaussion 10050469 Addresses https://github.com/pydata/xarray/issues/781 @jhamman what do you think? I'm not sure if ``infer_interval_breaks`` is the best name for the keyword but I didn't come up with anything better than that. (maybe ``infer_coord_intervals``?) 2016-11-03T22:35:29Z 2016-11-10T22:55:03Z 2016-11-10T22:55:03Z 2016-11-10T22:55:03Z 8ded25088cbb92bdd588f3e2dcbb0491d280c623     0 b9ec680a8a1e7dbd0a481e9aa518cec09d8a1bee a4f5ec2263ee96059f87daec4c217d425ca94e51 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1079  
92875526 MDExOlB1bGxSZXF1ZXN0OTI4NzU1MjY= 1098 closed 0 Docs tweaks fmaussion 10050469 The multidimensional coords example is now built live. I tested this locally and tried to keep the look of the figures as close as possible to the original ones. CC @rabernat @shoyer (I also added a link to salem in the list of packages extending xarray - shameless self-promotion) 2016-11-08T22:50:34Z 2016-11-09T20:52:19Z 2016-11-09T17:44:49Z 2016-11-09T17:44:49Z 53994194560772ff926f6661bf143abeedda5b60     0 c013d710acf70bdbcb39bfce9ab33ada691f5a5f 2a17af77955a11e93fafccdc8bc619adfc9e402a MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1098  
93030342 MDExOlB1bGxSZXF1ZXN0OTMwMzAzNDI= 1099 closed 0 Add cartopy and netcdf4 to the doc build fmaussion 10050469 as discussed in https://github.com/pydata/xarray/pull/1098 2016-11-09T20:10:25Z 2016-11-09T20:41:04Z 2016-11-09T20:41:04Z 2016-11-09T20:41:04Z 3add6ce8cbefd3b6413179cd32796b32398159f1     0 b079e01157db0abc7945e90f55359411f92d8cbf 53994194560772ff926f6661bf143abeedda5b60 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1099  
93037270 MDExOlB1bGxSZXF1ZXN0OTMwMzcyNzA= 1101 closed 0 unpin package versions for doc build fmaussion 10050469   2016-11-09T20:55:47Z 2016-11-10T02:44:28Z 2016-11-09T21:07:01Z 2016-11-09T21:07:01Z 92095f759a4b61691bf494d46d8d3008d812c6f8     0 8e2b2f3188ce41b09309f85208c93364b4d70e37 3add6ce8cbefd3b6413179cd32796b32398159f1 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1101  
93177872 MDExOlB1bGxSZXF1ZXN0OTMxNzc4NzI= 1105 closed 0 Another attempt to get netCDF4 working on RTD + py3 fmaussion 10050469 Sorry @shoyer you might get a few of these debugging PRs today again. 2016-11-10T15:59:27Z 2016-11-10T16:50:18Z 2016-11-10T16:49:42Z 2016-11-10T16:49:42Z a7bb97cadc1578da03220115d3cff6718ac6ee25     0 9e7e04bdd3d38b9f1a5a90dcfc4c1ef4c5e5fbd1 92095f759a4b61691bf494d46d8d3008d812c6f8 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1105  
93368255 MDExOlB1bGxSZXF1ZXN0OTMzNjgyNTU= 1108 closed 0 py2 compat header fmaussion 10050469 As discussed in https://github.com/pydata/xarray/pull/1079 I just left out a couple of nearly empty ``__init__``s I also removed a couple of unused imports 2016-11-11T17:29:05Z 2016-11-11T18:01:11Z 2016-11-11T18:01:06Z 2016-11-11T18:01:06Z 10fc0846b1ae86d729ffd855641f4510947085a9     0 4360c6d6ee8f787ef113b6b979183621c0a24e1b 57facab09b2e78221ff35e2dfcf05e0c447f769e MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1108  
93374260 MDExOlB1bGxSZXF1ZXN0OTMzNzQyNjA= 1110 closed 0 Add default channel to conda on RTD fmaussion 10050469 As discussed here: https://github.com/pydata/xarray/issues/1106 I also added a section somewhere to print the packages versions on RTD. It will be useful to pin the versions again once it works, and is useful enough to stay on the docs I think. I just didn't really knew where to put it, other ideas welcome! 2016-11-11T18:13:25Z 2016-11-11T18:36:24Z 2016-11-11T18:36:23Z 2016-11-11T18:36:23Z 1ff3a0bdc4e41af88c32803b0f95557f021e2ceb     0 ce6537fa89fe5c89770c0429099666c19fbefb6a 10fc0846b1ae86d729ffd855641f4510947085a9 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1110  
93406633 MDExOlB1bGxSZXF1ZXN0OTM0MDY2MzM= 1112 closed 0 Bug in DecodedCFDatetimeArray fmaussion 10050469 Fixes https://github.com/pydata/xarray/issues/1111 2016-11-11T22:11:22Z 2016-11-13T18:04:00Z 2016-11-13T18:04:00Z 2016-11-13T18:04:00Z 0ed1e2c93732472ecf4985875982daaccc9fa34c     0 c952855db30b743d6c1b2aa4a3116be47d578ab6 1ff3a0bdc4e41af88c32803b0f95557f021e2ceb MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1112  
95380441 MDExOlB1bGxSZXF1ZXN0OTUzODA0NDE= 1134 closed 0 Further attempt to get netCDF4 working on RTD fmaussion 10050469 The idea came from here: https://github.com/Unidata/netcdf4-python/issues/574#issuecomment-235435628 I could test it on another repo, so I'm confident that this should work here too. Obviously, this is a temporary solution. hopefully fixes https://github.com/pydata/xarray/issues/1106 2016-11-26T19:25:45Z 2016-11-28T11:11:24Z 2016-11-26T21:48:40Z 2016-11-26T21:48:40Z b72d894154e182e90b56c76ac24d77d8f4a0677d     0 d85b096ff48b6c0219125e364cb5fc8aa0a9e195 76726e58710122e302790a05ae092c30d41d3553 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1134  
95385202 MDExOlB1bGxSZXF1ZXN0OTUzODUyMDI= 1136 closed 0 WIP: remove some refs to xray fmaussion 10050469 There are some uses of xray that needed to be fixed. WIP: merge after you decide what to do with https://github.com/pydata/xarray/issues/1135 Also, I'd be in favor of removing the two notebooks in https://github.com/pydata/xarray/tree/master/examples since they are also available in the docs (http://xarray.pydata.org/en/latest/examples.html). The example on RTD have the disadvantage that it's less easy to do copy/paste with them, but notebooks are more error prone since they need to be maintained externally. 2016-11-26T22:30:27Z 2016-11-26T23:01:53Z 2016-11-26T23:00:50Z 2016-11-26T23:00:50Z 1936ea39f22333bd5fd766d125429ba1cab37f1e     0 2cd473b05e33858097a8a40fa7a947a7a82feb7e b72d894154e182e90b56c76ac24d77d8f4a0677d MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1136  
95400056 MDExOlB1bGxSZXF1ZXN0OTU0MDAwNTY= 1137 closed 0 Pin package versions on RTD fmaussion 10050469 Now that we seem to have everything working on RTD, re-pin package versions (follow-up to https://github.com/pydata/xarray/pull/1101) 2016-11-27T11:38:11Z 2016-11-28T03:45:12Z 2016-11-28T03:45:11Z 2016-11-28T03:45:11Z 3a2f06f961871b8a110d9c26521e9f10332259b9     0 e0fe3f64193dadb9f9cc4ef679a9243928e09f37 1936ea39f22333bd5fd766d125429ba1cab37f1e MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1137  
95553209 MDExOlB1bGxSZXF1ZXN0OTU1NTMyMDk= 1139 closed 0 Unpin python on RTD fmaussion 10050469 Pinning python to 3.5 introduced new [problems](https://readthedocs.org/projects/xray/builds/4723418/). Despite the default python being 3 [here](https://github.com/pydata/xarray/blob/master/readthedocs.yml#L4) and also in our RTD preferences (dashboard->advanced), RTD seems to still use py2 per default... Anyway, going back to py2 is the easiest for now, I might come back to this when I have more time. 2016-11-28T18:35:51Z 2016-11-28T22:13:58Z 2016-11-28T20:00:17Z 2016-11-28T20:00:17Z bfff59a1c4c5795277abeb753e4c92cc891f8c08     0 0710df7b945519c9058c6850919502cbd811637c 3a2f06f961871b8a110d9c26521e9f10332259b9 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1139  
95589089 MDExOlB1bGxSZXF1ZXN0OTU1ODkwODk= 1141 closed 0 Try py3 again on RTD fmaussion 10050469 sorry about the many PRs :-( Let's see what happens with this one 2016-11-28T22:27:33Z 2016-11-28T23:38:59Z 2016-11-28T23:38:59Z 2016-11-28T23:38:59Z f6577d6e609acd6814f2699e7a68ab3b00b97110     0 a616d91bce636d59c2c7b751ea5a83bb64be9e7a bfff59a1c4c5795277abeb753e4c92cc891f8c08 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1141  
95978225 MDExOlB1bGxSZXF1ZXN0OTU5NzgyMjU= 1144 closed 0 Update ipython on RTD fmaussion 10050469 Another attempt to solve a cryptic error: https://readthedocs.org/projects/xray/builds/4727274/ But this time we are getting closer! I've found a report on ipython (https://github.com/ipython/ipython/issues/8850), an I've been able to reproduce it locally and solve it by updating to ipython 5 2016-11-30T21:33:55Z 2016-11-30T22:56:24Z 2016-11-30T22:45:41Z 2016-11-30T22:45:41Z b21948d7e89262042beb3a93df8e7afaf62695a4     0 4476c12b61aabf040fd997f959eded09c2acff64 f6577d6e609acd6814f2699e7a68ab3b00b97110 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1144  
96956294 MDExOlB1bGxSZXF1ZXN0OTY5NTYyOTQ= 1155 closed 0 RTD: fix savefig dir creation fmaussion 10050469 I've had a hard time finding out what was going on with missing RTD plots since we updated the packages until I came across this: https://github.com/ipython/ipython/issues/8733 The proposed fix creates the ``@savefig`` directory if not there. It works locally but I'm not sure if it will work on RTD (they might use a custom build directory). The other changes are minor tweaks to remove some build warnings and/or making use of the latest sphinx Makefile. I also removed a part of the conf.py which I think is not needed anymore. @shoyer do you remember what the ``inspect.findsource`` monkeypatch was good for? 2016-12-07T16:21:01Z 2016-12-07T16:53:07Z 2016-12-07T16:38:03Z 2016-12-07T16:38:03Z 42133049b2a2240bd8c159f61a88157f42a78dc3     0 e2c28c7d0ce7775a6e67acd36a8696bef2baf949 c2717d13bcf4b2f6681e64b6d523cc3469fa7861 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1155  
96969622 MDExOlB1bGxSZXF1ZXN0OTY5Njk2MjI= 1156 closed 0 RTD: furter attempt to fix savefig fmaussion 10050469 This implements a more robust solution based on the location of ``conf.py``... 2016-12-07T17:26:07Z 2016-12-07T17:30:18Z 2016-12-07T17:30:18Z 2016-12-07T17:30:18Z 21b22808793cfd0905047d0384a26c13507db93b     0 955e1138efc776726d9d9e889d85286e8ee9d624 42133049b2a2240bd8c159f61a88157f42a78dc3 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1156  
97112491 MDExOlB1bGxSZXF1ZXN0OTcxMTI0OTE= 1158 closed 0 RTD: fix docs fmaussion 10050469   2016-12-08T12:24:09Z 2016-12-29T02:38:59Z 2016-12-08T12:24:27Z 2016-12-08T12:24:27Z 8b54f939bc84b20ad4670f22375d2fd7c1761b7a     0 03b7acddb81c0c40ca3c2711bec1b85d9b6f0d3e 21b22808793cfd0905047d0384a26c13507db93b MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1158  
97163635 MDExOlB1bGxSZXF1ZXN0OTcxNjM2MzU= 1160 closed 0 Norm should be passed to facetgrid too fmaussion 10050469 fixes https://github.com/pydata/xarray/issues/1159 2016-12-08T17:15:32Z 2016-12-09T09:47:05Z 2016-12-09T09:46:58Z 2016-12-09T09:46:58Z 2c7730d08a674ba6475acb596d4f12afb839f785     0 d6f16e8caab4502ba5c6fdc19c14478e0b0246a5 8b54f939bc84b20ad4670f22375d2fd7c1761b7a MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1160  
98388171 MDExOlB1bGxSZXF1ZXN0OTgzODgxNzE= 1168 closed 0 Add figsize, size, and aspect arguments to plotting methods fmaussion 10050469 Extends and finishes https://github.com/pydata/xarray/pull/637 I chose to keep seaborn's convention for two reasons: - it doesn't break existing code - now that ``figsize`` is also available, I expect the ``size`` and ``aspect`` kwargs to be less used in non-facetgrid plots Closes https://github.com/pydata/xarray/issues/897 2016-12-16T19:18:13Z 2016-12-18T22:43:19Z 2016-12-18T22:43:19Z 2016-12-18T22:43:19Z d31cb80fa7ca35437cde9a23a16935ea3bd6025d     0 fb28d5ebc842dd105aada2c1f21d2c1c0761f933 89a6732346542b234c0c655034c6e0ab49fecc56 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1168  
98409580 MDExOlB1bGxSZXF1ZXN0OTg0MDk1ODA= 1169 closed 0 DOC: small improvements to the netCDF docs fmaussion 10050469 Partly addresses https://github.com/pydata/xarray/issues/768#issuecomment-187226020 and https://github.com/pydata/xarray/issues/1154, mostly by making the tone less defensive. I also added that we recommend the netCDF format for IO. (I think that the format is powerful enough for being useful in other disciplines than geosciences). I agree with @rabernat that the current page title (Serialization and IO) could be changed to something more accessible, but I don't know how. Two possibilities, both quite long (it looks a bit ugly on RTD): - "Reading and writing xarray data structures on disk" - "Reading/writing xarray data structures" 2016-12-16T21:58:17Z 2016-12-24T11:54:51Z 2016-12-24T11:54:51Z 2016-12-24T11:54:51Z 88cc396f5117c09c76e15d6383aeca32b4d4a8bd     0 32f95307a792a72cbb1d534542f906159f144e10 89a6732346542b234c0c655034c6e0ab49fecc56 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1169  
98475945 MDExOlB1bGxSZXF1ZXN0OTg0NzU5NDU= 1171 closed 0 Fix tests for upcoming matplotlib v2 fmaussion 10050469 Just to see what happens with the upcoming matplotlib version 2 2016-12-18T14:20:19Z 2017-01-04T07:43:04Z 2017-01-04T07:43:04Z 2017-01-04T07:43:04Z 3001ee18462cdab5d367a8ecb3275774ca2ab89c     0 17290d87d8b58d01c827bfe9da006b2259739fbd 71d6a0e8bc89d7bbb4f89590139946e9fdf4f57d MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1171  
99671769 MDExOlB1bGxSZXF1ZXN0OTk2NzE3Njk= 1191 closed 0 Integer levels and vmin/vmax fmaussion 10050469 Follow-up to https://github.com/pydata/xarray/pull/1171#issuecomment-269556898 From the new docstring: ``` levels : int or list-like object, optional Split the colormap (cmap) into discrete color intervals. If an integer is provided, "nice" levels are chosen based on the data range: this can imply that the final number of levels is not exactly the expected one. Setting ``vmin`` and/or ``vmax`` with ``levels=N`` is equivalent to setting ``levels=np.linspace(vmin, vmax, N)``. ``` The logic overhead is quite simple, which is an argument in favor of this simple solution. It is consistent with mpl, as long as neither vmin or vmax are set. It _might_ change the outcome of some existing plots, though. Should I mention this in the "Breaking changes" section too? 2016-12-29T16:10:22Z 2017-01-03T09:50:14Z 2017-01-03T09:50:14Z 2017-01-03T09:50:14Z 71d6a0e8bc89d7bbb4f89590139946e9fdf4f57d     0 dace3eb864d191ce08c4ed5fdf713d892006ea70 feed9223129fbb87cadf698275088687755cc12d MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1191  
101496450 MDExOlB1bGxSZXF1ZXN0MTAxNDk2NDUw 1206 closed 0 RTD: fix facetted maps example fmaussion 10050469 follow-up to https://github.com/pydata/xarray/pull/1203 2017-01-13T18:48:08Z 2017-01-14T09:15:54Z 2017-01-14T09:15:54Z 2017-01-14T09:15:54Z 295e6514d945e8f362a41b4d991b7403739d12cc     0 e6770fd41c4b927a41c80ab9c7d1da5d283eb135 9a7e50279507dfa3023632b1a39116492a563698 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1206  
102283195 MDExOlB1bGxSZXF1ZXN0MTAyMjgzMTk1 1220 closed 0 Fix docs fmaussion 10050469 This PR fixes a problem we had with ipython on RTD: https://github.com/ipython/ipython/issues/8733 We this simple workaround we can now use the latest ipython version. Thanks to @takluyver for his help! 2017-01-19T15:04:34Z 2017-01-20T17:05:54Z 2017-01-20T08:48:45Z 2017-01-20T08:48:45Z fec5bac40a6bdd377dd69b8dbbad91169be46839     0 8368f1ef17c06af5adbe7bf6e577bffd0a98fa61 b44b37a5bd8fb613e6a7ce9c82c91e31b7ddf9bc MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1220  
102451217 MDExOlB1bGxSZXF1ZXN0MTAyNDUxMjE3 1222 closed 0 New testing module and tests refactor fmaussion 10050469 - [x] closes https://github.com/pydata/xarray/issues/1218 - [x] tests added / passed - [x] whatsnew entry 2017-01-20T12:04:01Z 2017-01-24T21:25:33Z 2017-01-24T21:18:20Z 2017-01-24T21:18:20Z c800e48f0d22867e6c0ad714f61652c0e56e7cf2     0 e5605c6de62a9025eb26ef4f2dd7d805368095c3 6d5ad44e4666a50ed91a201ce28ad0b4e3d727a4 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1222  
103023113 MDExOlB1bGxSZXF1ZXN0MTAzMDIzMTEz 1227 closed 0 mpl v2 for the docs fmaussion 10050469 For some reason I can't reach the webpage but @shoyer seems to be able to do so: https://github.com/pydata/xarray/issues/1167#issuecomment-274966778 2017-01-24T23:04:55Z 2017-01-25T00:00:55Z 2017-01-25T00:00:55Z 2017-01-25T00:00:55Z 709ef84091a4acb7caddd43fd33511adcdfaf8ec     0 ef4fbbe472c35646c19c8e2829ffe21e69f7c9c5 c800e48f0d22867e6c0ad714f61652c0e56e7cf2 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1227  
103666052 MDExOlB1bGxSZXF1ZXN0MTAzNjY2MDUy 1235 closed 0 Use LooseVersion for bottleneck checks fmaussion 10050469 - [x] closes https://github.com/pydata/xarray/issues/1208 - [ ] tests added / passed - [x] passes ``git diff upstream/master | flake8 --diff`` - [ ] whatsnew entry 2017-01-29T23:54:16Z 2017-01-30T00:10:40Z 2017-01-30T00:10:40Z 2017-01-30T00:10:40Z 384c9b3ebc5c25d111700bd2f8c998a557da888f     0 dadd37a508b5de1ac99e414faab2f6f7f7a4d427 6ccbdfd065e135bc58c409ff8fb6b2f4739fb4d5 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1235  
105704757 MDExOlB1bGxSZXF1ZXN0MTA1NzA0NzU3 1260 closed 0 Add RasterIO backend fmaussion 10050469 Follow-up to https://github.com/pydata/xarray/pull/1070 This is my first backend so this is going to be a bit more work than I expected, but with your help we should be able to get through this. A long todo list: - [x] closes https://github.com/pydata/xarray/issues/790 - [x] add tests - [x] passes ``git diff upstream/master | flake8 --diff`` - [x] whatsnew entry - [x] wrap __getitem__ for lazy data read - [x] ~~make coordinates variables lazy too~~ 2017-02-10T20:59:31Z 2017-06-06T16:44:43Z 2017-06-06T10:25:22Z 2017-06-06T10:25:22Z 48c7164d38eaf20e166303df7cb8e7a61caa4e05     0 d5c964e882e68470946eca9b97ac1908c7578e4b c2588dadff82f2e56b9ec9c10d6d57661dbcce15 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1260  
109142875 MDExOlB1bGxSZXF1ZXN0MTA5MTQyODc1 1296 closed 0 Clearer terminology for coordinate variables fmaussion 10050469 - [x] closes https://github.com/pydata/xarray/issues/1295 2017-03-05T10:08:41Z 2017-03-15T16:28:12Z 2017-03-15T16:28:12Z 2017-03-15T16:28:12Z 57776ab6db0904f5240d89b1835df961b0fe0848     0 3bc8e05f239deab1163f92a9018810ae571f5f3b 7f71e4087147938afa503e1460a05631f07c5c24 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1296  
116141874 MDExOlB1bGxSZXF1ZXN0MTE2MTQxODc0 1377 closed 0 Remove debug print() fmaussion 10050469 This was introduced by https://github.com/pydata/xarray/pull/1368 (@shoyer) 2017-04-17T14:29:42Z 2017-04-17T17:45:46Z 2017-04-17T17:45:44Z 2017-04-17T17:45:44Z b6707198c413a6a25da2b778d31f1fb7d4d997b0     0 9bb7ea4368d03ef62c804ecfabf052861a4cee04 6753ec4acb40e9fe17b906e655c9ddb687bb7559 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1377  
119976298 MDExOlB1bGxSZXF1ZXN0MTE5OTc2Mjk4 1402 closed 0 Adds bottleneck to the test suite fmaussion 10050469 - [x] closes https://github.com/pydata/xarray/issues/1401 - [ ] tests added / passed - [ ] passes ``git diff upstream/master | flake8 --diff`` - [ ] whatsnew entry I don't know if we need to install all packages to cover all the tests which rely on bottleneck, but this was the easiest. 2017-05-10T20:54:04Z 2017-05-10T23:11:06Z 2017-05-10T23:10:58Z 2017-05-10T23:10:58Z fd6e36e9869236ddf1862d4b5268ab2e07576e21     0 1ba2af963cd918bf79d28eb8a335f0375b616007 e1982faf8e906ccdcb16b07462ffa77fd13bf69c MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1402  
120094098 MDExOlB1bGxSZXF1ZXN0MTIwMDk0MDk4 1404 closed 0 Fix pandas.tslib deprecation warning fmaussion 10050469 - [ ] closes #xxxx - [ ] tests added / passed - [ ] passes ``git diff upstream/master | flake8 --diff`` - [ ] whatsnew entry Since the last pandas update I get: ``` /home/mowglie/Documents/git/xarray/xarray/core/formatting.py:16: FutureWarning: The pandas.tslib module is deprecated and will be removed in a future version. from pandas.tslib import OutOfBoundsDatetime ``` 2017-05-11T12:29:13Z 2017-05-11T16:46:23Z 2017-05-11T16:46:23Z 2017-05-11T16:46:23Z ba6351b14d6a6ba2d12b8ae8aacc9c4b76bdc003     0 e20ca57b511c8e6931ca534a19990363b17ce614 fd6e36e9869236ddf1862d4b5268ab2e07576e21 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1404  
121655717 MDExOlB1bGxSZXF1ZXN0MTIxNjU1NzE3 1417 closed 0 Update weather data example fmaussion 10050469 - [ ] Closes #xxxx - [ ] Tests added / passed - [ ] Passes ``git diff upstream/master | flake8 --diff`` - [ ] Fully documented, including `whats-new.rst` for all changes and `api.rst` for new API For some reason a plot from the examples was rendered statically instead of live. This is now fixed, together with an update of pandas which prevents reshaping operations on indexes. Tested [here](http://xarray.pydata.org/en/fix-docs/examples/weather-data.html) 2017-05-21T10:31:06Z 2017-05-21T19:03:04Z 2017-05-21T10:33:08Z 2017-05-21T10:33:08Z 5f92955f8f6e6378b690b922986de789985d2307     0 2b8077e48241fe7447ccb562407a4eb9ed159aa2 d5c7e0612e8243c0a716460da0b74315f719f2df MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1417  
121659964 MDExOlB1bGxSZXF1ZXN0MTIxNjU5OTY0 1419 closed 0 Add sphinx-gallery to the docs fmaussion 10050469 - [x] Closes https://github.com/pydata/xarray/issues/1061 - [ ] Tests added / passed - [ ] Passes ``git diff upstream/master | flake8 --diff`` - [x] Fully documented, including `whats-new.rst` for all changes and `api.rst` for new API This uses [sphinx-gallery](http://sphinx-gallery.readthedocs.io) to illustrate some examples of the xarray workflow. See it rendered [here](http://xarray.pydata.org/en/fix-docs/auto_gallery/index.html) It's nicer for the gallery if there is a plot to draw in the end but it doesn't *have* to be a plot. Once the gallery gets more examples it's possible to sort them by topic (see the sphinx gallery documentation for an overview of the possibilities). I could think of several other things we could add (including moving or copying @jhamman and @rabernat 's examples to the gallery), but I thought it's better to merge quickly in order to encourage the community to contribute with more examples before the next release. 2017-05-21T13:00:44Z 2017-05-24T15:20:41Z 2017-05-24T15:20:41Z 2017-05-24T15:20:40Z f7eb309368a75f5010261c23b95eaa9625d7353a     0 cc687da609b864737f0da295c3592ac3b1e852f2 3737d2610bb6466babc5fe623eb8444d44dc0ceb MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1419  
123027910 MDExOlB1bGxSZXF1ZXN0MTIzMDI3OTEw 1432 closed 0 Add dask specific kwargs to DataArray.chunk() fmaussion 10050469 - [ ] Closes #xxxx - [ ] Tests added / passed - [x] Passes ``git diff upstream/master | flake8 --diff`` - [x] Fully documented, including `whats-new.rst` for all changes and `api.rst` for new API this is needed for the Rasterio PR (https://github.com/pydata/xarray/pull/1260#discussion_r118824181) There was no test for these functionalities in the xarray test suite for ``Dataset`` either, so I just added a dummy test for one of the keywords. 2017-05-30T11:30:27Z 2017-05-30T18:04:02Z 2017-05-30T16:50:02Z 2017-05-30T16:50:02Z 8df660b37692e42965a672563941d85ed6d55229     0 a5335f2336dd5dbce0d235fdb7e1f1c50e24699f 9287caa70ea69d4afe07f111fed2b99f795f069d MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1432  
124159334 MDExOlB1bGxSZXF1ZXN0MTI0MTU5MzM0 1443 closed 0 DOC: add salem to the list of projects extending xarray fmaussion 10050469 [Salem](https://github.com/fmaussion/salem) is likely to remain a small project but it has a more-than-one user base and might provide some inspiration for the future [pangeo](https://pangeo-data.github.io) projects. 2017-06-06T10:37:50Z 2017-06-07T11:59:52Z 2017-06-07T11:57:35Z 2017-06-07T11:57:35Z 33bc77074a063eecbc066989051998f84db111b0     0 c7a20dcbb005b4d88d67aec607d76d754d071685 48c7164d38eaf20e166303df7cb8e7a61caa4e05 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1443  
124444851 MDExOlB1bGxSZXF1ZXN0MTI0NDQ0ODUx 1445 closed 0 DOC: add rasterio to build environment fmaussion 10050469 This is needed for the doc recipe to run 2017-06-07T15:08:05Z 2017-06-07T15:11:08Z 2017-06-07T15:11:07Z 2017-06-07T15:11:07Z e39dae4c4ba83de09bea16ed5b3132ce4e88ba98     0 75f39b96a5cae28da7caa0aae9891cdb0140d402 33bc77074a063eecbc066989051998f84db111b0 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1445  
134326508 MDExOlB1bGxSZXF1ZXN0MTM0MzI2NTA4 1502 closed 0 Fix rasterio builds in docs fmaussion 10050469 - [ ] Closes #xxxx - [ ] Tests added / passed - [ ] Passes ``git diff upstream/master | flake8 --diff`` - [ ] Fully documented, including `whats-new.rst` for all changes and `api.rst` for new API The pinned version of rasterio we use for the doc builds isn't available anymore: https://github.com/conda-forge/rasterio-feedstock/pull/36 Tests: - builds: https://readthedocs.org/projects/xray/builds/5796746/ - displays correctly: http://xarray.pydata.org/en/fix-docs/auto_gallery/plot_rasterio.html#sphx-glr-auto-gallery-plot-rasterio-py 2017-08-06T13:30:39Z 2017-08-07T09:21:39Z 2017-08-07T09:21:39Z 2017-08-07T09:21:39Z 4ebc8ab4d79219f8120dbc501eca75d16f9df471     0 80ba78628a4decbe2630b77e2926784f73f8d09b e3e6db5b1bf94fd78c5a1b9d872ea8dcb91a7b9c MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1502  
152125692 MDExOlB1bGxSZXF1ZXN0MTUyMTI1Njky 1712 closed 0 Use rasterio's transform instead of homemade coordinates fmaussion 10050469 - [x] Closes https://github.com/pydata/xarray/issues/1686 - [x] Tests added / passed - [x] Passes ``git diff upstream/master **/*py | flake8 --diff`` - [ ] Fully documented, including `whats-new.rst` for all changes and `api.rst` for new API 2017-11-12T21:52:04Z 2018-01-26T13:51:15Z 2018-01-26T13:50:54Z 2018-01-26T13:50:54Z 015daca45bd7be32377bdf429c02117d5955452c     0 21957aaec977f9d222441d0d33ddc2075225167a 009291139fde0c859ee565141cdb3b6a3d28cba0 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1712  
160925414 MDExOlB1bGxSZXF1ZXN0MTYwOTI1NDE0 1808 closed 0 Add gallery example for multiple lines plot fmaussion 10050469 Extends https://github.com/pydata/xarray/pull/1804 by adding some usage examples to the gallery. Here is how the plot looks like: ![sphx_glr_plot_lines_from_2d_001](https://user-images.githubusercontent.com/10050469/34524787-12d5eb82-f09d-11e7-9bb0-62070a62f6e6.png) cc @dcherian and @shoyer 2018-01-03T14:45:48Z 2018-01-03T18:34:40Z 2018-01-03T18:34:40Z 2018-01-03T18:34:40Z 5a28b89d8f32a16d8529d6514c04992b5ee7a349     0 613a64e201e990d84a4a1793f2a01dcaf85b7c01 30c849eed36f313db90a0f2e3eb8a135991240f6 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1808  
166787888 MDExOlB1bGxSZXF1ZXN0MTY2Nzg3ODg4 1881 closed 0 Fix rasterio example in docs fmaussion 10050469 https://github.com/pydata/xarray/pull/1796 introduced a bug in the doc gallery. This PR reverts the code to the previous greyscale example and adds a new case using imshow (the use case is different, as I tried to explain in the descriptions). I also took care of https://github.com/pydata/xarray/issues/1789#issuecomment-356068358 : the docs should now build even when rasterio is not installed. cc @Zac-HD , @shoyer 2018-02-02T12:13:33Z 2018-02-02T19:11:01Z 2018-02-02T19:10:54Z 2018-02-02T19:10:54Z e9b98d032adf75509c430056c086389f5f3134fc     0 edca54dc9566dd45b27b42a9591eb8c79e741340 becd77c44d9436a142db4a98de2b30d388ee6d2b MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1881  
167427609 MDExOlB1bGxSZXF1ZXN0MTY3NDI3NjA5 1890 closed 0 Simplify some rasterio tests fmaussion 10050469 - [x] Closes https://github.com/pydata/xarray/issues/1843 - [x] Tests added - [x] Tests passed - [x] Fully documented, including `whats-new.rst` for all changes and `api.rst` for new API This PR restores the tests that were incorrectly removed in https://github.com/pydata/xarray/pull/1817 and adds the what's new entry I forgot in https://github.com/pydata/xarray/pull/1712 2018-02-06T14:24:34Z 2018-02-07T08:40:34Z 2018-02-07T08:40:34Z 2018-02-07T08:40:34Z 1d3239982db9778e89a48fe55b01d0a525673a7a     0 b92e516d4611aef6928173b2e485290a99d191ce 7357a07806d2493c7cb2765f01d54ec9a8f2c87d MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1890  
167428781 MDExOlB1bGxSZXF1ZXN0MTY3NDI4Nzgx 1891 closed 0 Use pip install -e in contributing docs fmaussion 10050469 I think that pip install is the recommended way to install packages in dev mode (see also http://www.python3statement.org/practicalities/ ) 2018-02-06T14:28:52Z 2018-02-06T19:59:04Z 2018-02-06T19:59:04Z 2018-02-06T19:59:04Z 518436576b1661bb04e95987abf7678749b3d634     0 ffba12fecd8ecc8f50a0717c19cfd0a7ef2d3c72 7357a07806d2493c7cb2765f01d54ec9a8f2c87d MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1891  
168415605 MDExOlB1bGxSZXF1ZXN0MTY4NDE1NjA1 1902 closed 0 _color_palette consistent with or without seaborn fmaussion 10050469 - [x] Closes https://github.com/pydata/xarray/issues/1896 - [ ] Tests added - [ ] Tests passed - [x] Fully documented, including `whats-new.rst` for all changes and `api.rst` for new API Instead of relying on seaborn per default we now use mpl and fall back to seaborn if cmap is not recognized (e.g. with `cmap="husl"`). 2018-02-10T19:00:59Z 2018-02-16T21:08:32Z 2018-02-16T21:08:32Z 2018-02-16T21:08:32Z 8c5c549e842644b3b5acabf40a98d7fe7e33ad89     0 f8917f354361166c3dd68207affa43be9b9223ba d191352b6c1e15a2b6105b4b76552fe974231396 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1902  
172675782 MDExOlB1bGxSZXF1ZXN0MTcyNjc1Nzgy 1958 closed 0 Update some packages on RTD fmaussion 10050469 See https://github.com/pydata/xarray/pull/1957 2018-03-03T16:41:00Z 2018-03-03T16:41:10Z 2018-03-03T16:41:10Z 2018-03-03T16:41:10Z a32475bb21b0efd83c30f36e41346c00f77f4b52     0 3a754a3ed1e39682bbca31459de71343ebb25264 350e97793f89ddd4097b97e0c4af735a5144be24 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/1958  
177249971 MDExOlB1bGxSZXF1ZXN0MTc3MjQ5OTcx 2015 closed 0 Fix an overflow bug in decode_cf_datetime fmaussion 10050469 - [x] Closes https://github.com/pydata/xarray/issues/2002 - [x] Tests added - [x] Tests passed - [x] Fully documented, including `whats-new.rst` for all changes and `api.rst` for new API Not sure yet if this is the best way to do this. 2018-03-24T17:54:36Z 2018-03-31T01:16:15Z 2018-03-31T01:16:14Z 2018-03-31T01:16:14Z c78469a63417d9b7da0d5662788f10fb82923ea3     0 8283967ec13d5d7780806c00ee49d14aeb756973 7c2c43ce6b1792e1193635ab9b64fd248266f632 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/2015  
184908816 MDExOlB1bGxSZXF1ZXN0MTg0OTA4ODE2 2091 closed 0 DOC: uniformize variable names in indexing.rst fmaussion 10050469 - [x] Closes https://github.com/pydata/xarray/issues/2088 https://github.com/pydata/xarray/commit/6402391cf206fd04c12d44773fecd9b42ea0c246 overwrote an array which was needed later on. In general the whole page was a bit messy with the same initial array being forgotten and then re-used much later. This PR attempts to uniformize the variable names in order to make self-consistent subsection examples. I hope I didn't brake something on the way, but it looks ok on my local build. (also renamed a gallery example plot which wasn't showing up correctly) 2018-04-30T09:11:14Z 2018-04-30T17:17:53Z 2018-04-30T17:17:53Z 2018-04-30T17:17:52Z d1e1440dc5d0bc9c341da20fde85b56f2a3c1b5b     0 a5d767136ca609581f4b121ea263108bae1e661e c42cbe787d530db48575d73fe7a3910b0a0e4fd8 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/2091  
188676780 MDExOlB1bGxSZXF1ZXN0MTg4Njc2Nzgw 2146 closed 0 Add favicon to docs? fmaussion 10050469 Don't know if we want this, but it's possible to replace the default RTD icon. I'm not even sure if the cool kids are using bookmarks anymore, but I still do. This is how it looks like on my Firefox fav tab: ![selection_054](https://user-images.githubusercontent.com/10050469/40169465-597840fc-59c6-11e8-8287-87f6663d05ea.png) 2018-05-17T09:35:21Z 2018-05-19T20:37:18Z 2018-05-17T16:55:31Z 2018-05-17T16:55:31Z 7bab27cc637a60bff2b510d4f4a419c9754eeaa3     0 27c07bfed9c9083de0c5c663bc0d075768315149 008c2c8e7544b0d8ea4e2fecde5625afabe6ea63 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/2146  
198469230 MDExOlB1bGxSZXF1ZXN0MTk4NDY5MjMw 2260 closed 0 Plotting: do not check for monotonicity with 2D coords fmaussion 10050469 - [x] Closes https://github.com/pydata/xarray/issues/2250 - [x] Tests added - [x] Tests passed - [x] Fully documented, including `whats-new.rst` for all changes and `api.rst` for new API 2018-06-30T09:47:20Z 2018-07-03T09:17:02Z 2018-07-03T09:16:27Z 2018-07-03T09:16:27Z 5ddfb6dc07f9de08bf95232df4a35e95a85fd113     0 e4a66115f70999be9de6844bcea6e5fc20a65ca7 04a78d50a928f4af2efc4e1d19370c76d822dbb6 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/2260  
202966281 MDExOlB1bGxSZXF1ZXN0MjAyOTY2Mjgx 2303 closed 0 Rename "Recipes" to "Gallery" fmaussion 10050469 Simply because it makes more sense after all. The link address won't change so it's not a biggie (http://xarray.pydata.org/en/latest/auto_gallery/index.html) 2018-07-20T22:03:27Z 2018-07-23T16:33:08Z 2018-07-23T16:33:08Z 2018-07-23T16:33:08Z 46732461d01fc1a2dd097599bb384b7306f1c0a5     0 9d964a0ab68cfa0689901842b204b20395570f03 b8a342ae845a7d734d391c4b597ee689ed9c6a72 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/2303  
203572590 MDExOlB1bGxSZXF1ZXN0MjAzNTcyNTkw 2310 closed 0 Make RTD builds faster fmaussion 10050469 See https://github.com/pydata/xarray/issues/2306 This makes the builds a little bit faster. But we are still very close to the 900 s limit. I tried to pin more packages this morning but this didn't work out. I'll merge this first (the latest build worked with this config, https://readthedocs.org/projects/xray/builds/) and try again at a later stage. 2018-07-24T15:45:17Z 2018-07-27T08:20:43Z 2018-07-27T08:20:43Z 2018-07-27T08:20:43Z 9802d618251eae88474f680999db4c23967c8f7a     0 28db89632475175ed90cec9e51394756ea338c9e 46732461d01fc1a2dd097599bb384b7306f1c0a5 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/2310  
204172929 MDExOlB1bGxSZXF1ZXN0MjA0MTcyOTI5 2317 closed 0 Remove test on rasterio rc and test for 0.36 instead fmaussion 10050469 See https://github.com/pydata/xarray/issues/2316 2018-07-26T15:03:20Z 2018-07-30T11:05:37Z 2018-07-30T11:05:30Z 2018-07-30T11:05:30Z 5d8670f6949fed60ab570075ae7dc67200f9ff51     0 78e760c9c60a55798e885db1112ab738cfad4e0c ded0a684136540962bcc409e6272b1cebb5af30a MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/2317  
216948981 MDExOlB1bGxSZXF1ZXN0MjE2OTQ4OTgx 2425 closed 0 Plotting: restore xyincrease kwarg default to True fmaussion 10050469 - [x] Closes https://github.com/pydata/xarray/issues/2422 - [x] Tests added - [x] Tests passed - [x] Fully documented, including `whats-new.rst` https://github.com/pydata/xarray/pull/2294 introduced the new ``xincrease`` and ``yincrease`` kwargs and a behavior documented as: ``` xincrease : None, True, or False, optional Should the values on the x axes be increasing from left to right? if None, use the default for the matplotlib function. ``` The default was ``None``, I suggest to set it to ``True``: it was the default before https://github.com/pydata/xarray/pull/2294 and I think it is what most users expect. 2018-09-20T12:12:48Z 2018-09-21T17:36:23Z 2018-09-21T17:36:21Z 2018-09-21T17:36:21Z c1c576f75a2c4c2f8fad314c10588f45c5a5c573     0 5fdebb4e82c71aa882ace74d97caf100f0f37511 5b87b6e2f159b827f739e12d4faae57a0b6f6178 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/2425  
224475809 MDExOlB1bGxSZXF1ZXN0MjI0NDc1ODA5 2498 closed 0 Small fix in rasterio docs fmaussion 10050469 - [x] Closes https://github.com/pydata/xarray/issues/2497 2018-10-20T13:48:51Z 2018-10-22T00:01:09Z 2018-10-22T00:01:07Z 2018-10-22T00:01:05Z dffbcb8b7a6745ddbb061d554c0475afb9122bf3     0 9c8a265331516725dd214229c4fa89476ce2e170 9f4474d657193f1c7c9aac25bb2edf94755a8593 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/2498  
229882465 MDExOlB1bGxSZXF1ZXN0MjI5ODgyNDY1 2552 closed 0 Attempt to reproduce HDF error fmaussion 10050469 This is just a test to see if I can reproduce an HDF error reported in https://github.com/pydata/xarray/issues/2551 2018-11-10T10:22:47Z 2018-11-11T12:10:46Z 2018-11-11T12:10:46Z   c6d32bd9b9ccea2c67ba661b585e00e65e1aa03d     0 de9c9a53d87b08cc924bf15517e448c2216b29b3 575e97aef405c9b473508f5bc0e66332df4930f3 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/2552  
233328978 MDExOlB1bGxSZXF1ZXN0MjMzMzI4OTc4 2571 closed 0 CF: also decode time bounds when available fmaussion 10050469 - [x] Closes https://github.com/pydata/xarray/issues/2565 - [x] Tests added - [x] Fully documented, including `whats-new.rst` for all changes and `api.rst` for new API Not sure if this is the best way to handle it, but it seems to work 2018-11-24T16:50:13Z 2018-12-19T17:19:05Z 2018-12-19T17:19:05Z 2018-12-19T17:19:04Z 57348abb1f4d00a3015d0e7f7a5f0df3c6b59481     0 0998d2b8a5e325b0d3061a8c72cadcd6b14376bb f8cced75f718ca0ad278224cf4b09bd42f5cd999 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/2571  
264131557 MDExOlB1bGxSZXF1ZXN0MjY0MTMxNTU3 2850 closed 0 More informative error when writing attrs to netCDF fmaussion 10050469 Closes #3080 Some attribute names aren't valid netCDF4 keys. For example: ```python import xarray as xr ds = xr.Dataset({'x': ('y', [1, 2, 3], {'CLASS': 'foo'})}) ds.to_netcdf('test.nc') ``` will fail with: ```NetCDF: String match to name in use``` This is hard to debug if you don't know which attribute is faulty. With this small change the error should be more informative: ```AttributeError: The following exception occurred when attempting to set attribute (CLASS, foo): "NetCDF: String match to name in use"``` 2019-03-25T13:58:30Z 2022-05-03T16:16:21Z 2022-05-03T16:16:21Z   1f9d9b64828e32a9950e3daf7c8563c251511c08     0 a50581ac193e530382c6720889aa5763e44e8772 7bf9df9d75c40bcbf2dd28c47204529a76561a3f MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/2850  
778907708 PR_kwDOAMm_X84ubTA8 5978 closed 0 Add "see also" in to_dataframe docs fmaussion 10050469 A very modest contribution... I miss contributing to xarray! Believe it or not, I did not know about `to_pandas` until today... 2021-11-11T21:15:15Z 2021-11-13T17:35:43Z 2021-11-13T17:35:43Z 2021-11-13T17:35:43Z 5e2f1dcf103da2b2b047b9d136c194a2e9a2e4f3     0 9299ca2dfbc7eec71532191e463e8fff5669798a 5871637873cd83c3a656ee6f4df86ea6628cf68a MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/5978  
779238754 PR_kwDOAMm_X84ucj1i 5981 closed 0 Allow string formatting of scalar DataArrays fmaussion 10050469 - [x] Closes https://github.com/pydata/xarray/issues/5976 - [x] Tests added - [x] Passes `pre-commit run --all-files` - [ ] User visible changes (including notable bug fixes) are documented in `whats-new.rst` This is a first try at formatting dataarray scalars. Here is the current behavior: ```python In [1]: import xarray as xr ...: import numpy as np In [2]: a = np.array(1) ...: da = xr.DataArray(a) In [3]: print(a) 1 In [4]: print(da) <xarray.DataArray ()> array(1) In [5]: print('{}'.format(a)) 1 In [6]: print('{}'.format(da)) <xarray.DataArray ()> array(1) In [7]: print('{:.3f}'.format(a)) 1.000 In [8]: print('{:.3f}'.format(da)) 1.000 In [9]: a = np.array([1, 2]) ...: da = xr.DataArray(a) In [10]: print('{}'.format(a)) [1 2] In [11]: print('{}'.format(da)) <xarray.DataArray (dim_0: 2)> array([1, 2]) Dimensions without coordinates: dim_0 In [12]: print('{:.3f}'.format(a)) --------------------------------------------------------------------------- TypeError Traceback (most recent call last) <ipython-input-12-c5afc7863e89> in <module> ----> 1 print('{:.3f}'.format(a)) TypeError: unsupported format string passed to numpy.ndarray.__format__ In [13]: print('{:.3f}'.format(da)) --------------------------------------------------------------------------- TypeError Traceback (most recent call last) <ipython-input-13-bddebd8462bd> in <module> ----> 1 print('{:.3f}'.format(da)) ~/disk/Dropbox/HomeDocs/git/xarray/xarray/core/common.py in __format__(self, format_spec) 162 return formatting.array_repr(self) 163 # Else why fall back to numpy --> 164 return self.values.__format__(format_spec) 165 166 def _iter(self: Any) -> Iterator[Any]: TypeError: unsupported format string passed to numpy.ndarray.__format__ ``` I don't think there is any backwards compatibility issue but lets see if the tests pass 2021-11-12T09:44:43Z 2022-05-09T15:25:25Z 2022-05-09T15:25:02Z 2022-05-09T15:25:02Z bbb14a5d8383520f1a1e7e6d885c03ecddfbcf47     0 34a38b1657599ad2a7c406f6746e754e989ca4f5 126051f2bf2ddb7926a7da11b047b852d5ca6b87 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/5981  
926778953 PR_kwDOAMm_X843PYZJ 6569 closed 0 Add some warnings about rechunking to the docs fmaussion 10050469 <!-- Feel free to remove check-list items aren't relevant to your change --> This adds some warnings at the right places when rechunking a dataset opened with `open_mfdataset` (see https://github.com/pangeo-data/rechunker/issues/100#issuecomment-1116189019 for context) Thanks to @dcherian for the wisdom of the day! 2022-05-03T16:48:02Z 2022-05-10T05:54:13Z 2022-05-10T05:54:05Z 2022-05-10T05:54:05Z 218e77a9f2f6af0fc2a944563eb0ba2e8f457051     0 5fca7b0149753b801ee2e5668e0aa791e7cd67c8 126051f2bf2ddb7926a7da11b047b852d5ca6b87 MEMBER   xarray 13221727 https://github.com/pydata/xarray/pull/6569  

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