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id node_id number title user state locked assignee milestone comments created_at updated_at ▲ closed_at author_association active_lock_reason draft pull_request body reactions performed_via_github_app state_reason repo type
596249070 MDU6SXNzdWU1OTYyNDkwNzA= 3954 Concatenate 3D array with 2D array zxdawn 30388627 open 0     5 2020-04-08T01:36:28Z 2022-05-06T16:39:22Z   NONE      

The 3D array has three dims: z, y and x. The 2D array has two dims: y and x. When I try to concatenate them by expanding the 2D array with z dim, there's something wrong in _dataset_concat

MCVE Code Sample

```python import xarray as xr import numpy as np

x = 2 y = 4 z = 3 data = np.arange(xyz).reshape(z, x, y)

3d array with coords

a = xr.DataArray(data, dims=['z', 'y', 'x'], coords={'z': np.arange(z)})

2d array without coords

b = xr.DataArray(np.arange(xy).reshape(x, y)1.5, dims=['y', 'x'])

expand 2d to 3d

b = b.expand_dims('z')

concat

comb = xr.concat([a, b], dim='z') ```

Expected Output

Same as np.concatenate: concat_array = np.concatenate((a, b)) comb = xr.DataArray(concat_array, dims={'z', 'y', 'x'})

``` <xarray.DataArray (z: 4, x: 2, y: 4)> array([[[ 0. , 1. , 2. , 3. ], [ 4. , 5. , 6. , 7. ]],

   [[ 8. ,  9. , 10. , 11. ],
    [12. , 13. , 14. , 15. ]],

   [[16. , 17. , 18. , 19. ],
    [20. , 21. , 22. , 23. ]],

   [[ 0. ,  1.5,  3. ,  4.5],
    [ 6. ,  7.5,  9. , 10.5]]])

Dimensions without coordinates: z, x, y ```

Problem Description

comb = xr.concat([a, b], dim='z') File "E:\miniconda3\envs\satpy\lib\site-packages\xarray\core\concat.py", line 135, in concat return f(objs, dim, data_vars, coords, compat, positions, fill_value, join) File "E:\miniconda3\envs\satpy\lib\site-packages\xarray\core\concat.py", line 455, in _dataarray_concat join=join, File "E:\miniconda3\envs\satpy\lib\site-packages\xarray\core\concat.py", line 395, in _dataset_concat raise ValueError("%r is not present in all datasets." % k) ValueError: 'z' is not present in all datasets.

As suggested by @dcherian, assigning the coordinate label by changing b = b.expand_dims('z') to b = b.expand_dims(z=[3]) makes it work.

Versions

Output of `xr.show_versions()` INSTALLED VERSIONS ------------------ commit: None python: 3.7.6 | packaged by conda-forge | (default, Jan 7 2020, 21:48:41) [MSC v.1916 64 bit (AMD64)] python-bits: 64 OS: Windows OS-release: 10 machine: AMD64 processor: Intel64 Family 6 Model 158 Stepping 9, GenuineIntel byteorder: little LC_ALL: None LANG: None LOCALE: None.None libhdf5: None libnetcdf: None xarray: 0.15.1 pandas: 1.0.3 numpy: 1.18.1 scipy: 1.4.1 netCDF4: None pydap: None h5netcdf: None h5py: None Nio: None zarr: None cftime: 1.1.1.2 nc_time_axis: None PseudoNetCDF: None rasterio: 1.1.3 cfgrib: None iris: None bottleneck: None dask: 2.10.1 distributed: 2.14.0 matplotlib: 3.2.1 cartopy: 0.17.0 seaborn: 0.10.0 numbagg: None setuptools: 46.1.3.post20200325 pip: 20.0.2 conda: None pytest: None IPython: 7.13.0 sphinx: 2.4.4 
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     xarray 13221727 issue
1086038682 I_kwDOAMm_X85Au6Ka 6095 Issue on page /examples/multidimensional-coords.html zxdawn 30388627 open 0     1 2021-12-21T17:04:09Z 2021-12-21T19:17:42Z   NONE      

The Groupby example focuses on lat_bin. Then the xc in the groupby_bins function should be yc.

 
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     xarray 13221727 issue

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