home / github

Menu
  • Search all tables
  • GraphQL API

issues

Table actions
  • GraphQL API for issues

1 row where repo = 13221727, state = "closed" and user = 6943441 sorted by updated_at descending

✎ View and edit SQL

This data as json, CSV (advanced)

Suggested facets: created_at (date), updated_at (date), closed_at (date)

type 1

  • issue 1

state 1

  • closed · 1 ✖

repo 1

  • xarray · 1 ✖
id node_id number title user state locked assignee milestone comments created_at updated_at ▲ closed_at author_association active_lock_reason draft pull_request body reactions performed_via_github_app state_reason repo type
502720385 MDU6SXNzdWU1MDI3MjAzODU= 3374 Key error in to_netcdf jsadler2 6943441 closed 0     5 2019-10-04T16:04:30Z 2023-03-14T21:14:33Z 2023-03-14T21:14:33Z NONE      

MCVE Code Sample

```python import xarray as xr

p = range(10) ds = xr.Dataset({'precip': (['time'], p)}, coords={'time': range(10)}) ds.attrs['Conventions'] = ['COARDS', 'GrADS'] ds.to_netcdf('a.nc') ```

Expected Output

Saves data to a.nc without error

Problem Description

In version 0.12.1 this works without error. In 0.12.2 it throws an error:

File "xarray_error.py", line 6, in <module> ds.to_netcdf('a.nc') File "C:\Users\jsadler\AppData\Local\Continuum\anaconda3\envs\nwm\lib\site-packages\xarray\core\dataset.py", line 1365, in to_netcdf compute=compute) File "C:\Users\jsadler\AppData\Local\Continuum\anaconda3\envs\nwm\lib\site-packages\xarray\backends\api.py", line 900, in to_netcdf store.close() File "C:\Users\jsadler\AppData\Local\Continuum\anaconda3\envs\nwm\lib\site-packages\xarray\backends\scipy_.py", line 226, in close self._manager.close() File "C:\Users\jsadler\AppData\Local\Continuum\anaconda3\envs\nwm\lib\site-packages\xarray\backends\file_manager.py", line 188, in close file.close() File "C:\Users\jsadler\AppData\Local\Continuum\anaconda3\envs\nwm\lib\site-packages\scipy\io\netcdf.py", line 299, in close self.flush() File "C:\Users\jsadler\AppData\Local\Continuum\anaconda3\envs\nwm\lib\site-packages\scipy\io\netcdf.py", line 409, in flush self._write() File "C:\Users\jsadler\AppData\Local\Continuum\anaconda3\envs\nwm\lib\site-packages\scipy\io\netcdf.py", line 420, in _write self._write_gatt_array() File "C:\Users\jsadler\AppData\Local\Continuum\anaconda3\envs\nwm\lib\site-packages\scipy\io\netcdf.py", line 442, in _write_gatt_array self._write_att_array(self._attributes) File "C:\Users\jsadler\AppData\Local\Continuum\anaconda3\envs\nwm\lib\site-packages\scipy\io\netcdf.py", line 450, in _write_att_array self._write_att_values(values) File "C:\Users\jsadler\AppData\Local\Continuum\anaconda3\envs\nwm\lib\site-packages\scipy\io\netcdf.py", line 562, in _write_att_values nc_type = REVERSE[values.dtype.char, values.dtype.itemsize] KeyError: ('U', 24)

If instead the attribute is saved as as string instead of a list, it works: ```python import xarray as xr

p = range(10) ds = xr.Dataset({'precip': (['time'], p)}, coords={'time': range(10)}) ds.attrs['Conventions'] = "['COARDS', 'GrADS']" ds.to_netcdf('a.nc') ```

Output of xr.show_versions()

INSTALLED VERSIONS ------------------ commit: None python: 3.7.4 (default, Aug 9 2019, 18:34:13) [MSC v.1915 64 bit (AMD64)] python-bits: 64 OS: Windows OS-release: 10 machine: AMD64 processor: Intel64 Family 6 Model 158 Stepping 10, GenuineIntel byteorder: little LC_ALL: None LANG: en_US.UTF-8 LOCALE: None.None libhdf5: None libnetcdf: None xarray: 0.12.2 pandas: 0.25.1 numpy: 1.17.1 scipy: 1.3.1 netCDF4: None pydap: installed h5netcdf: None h5py: None Nio: None zarr: 2.3.2 cftime: None nc_time_axis: None PseudonetCDF: None rasterio: None cfgrib: None iris: None bottleneck: None dask: 2.3.0 distributed: 2.5.1 matplotlib: 3.1.1 cartopy: None seaborn: None numbagg: None setuptools: 41.2.0 pip: 19.2.3 conda: None pytest: 5.1.2 IPython: 7.8.0 sphinx: None
{
    "url": "https://api.github.com/repos/pydata/xarray/issues/3374/reactions",
    "total_count": 0,
    "+1": 0,
    "-1": 0,
    "laugh": 0,
    "hooray": 0,
    "confused": 0,
    "heart": 0,
    "rocket": 0,
    "eyes": 0
}
  completed xarray 13221727 issue

Advanced export

JSON shape: default, array, newline-delimited, object

CSV options:

CREATE TABLE [issues] (
   [id] INTEGER PRIMARY KEY,
   [node_id] TEXT,
   [number] INTEGER,
   [title] TEXT,
   [user] INTEGER REFERENCES [users]([id]),
   [state] TEXT,
   [locked] INTEGER,
   [assignee] INTEGER REFERENCES [users]([id]),
   [milestone] INTEGER REFERENCES [milestones]([id]),
   [comments] INTEGER,
   [created_at] TEXT,
   [updated_at] TEXT,
   [closed_at] TEXT,
   [author_association] TEXT,
   [active_lock_reason] TEXT,
   [draft] INTEGER,
   [pull_request] TEXT,
   [body] TEXT,
   [reactions] TEXT,
   [performed_via_github_app] TEXT,
   [state_reason] TEXT,
   [repo] INTEGER REFERENCES [repos]([id]),
   [type] TEXT
);
CREATE INDEX [idx_issues_repo]
    ON [issues] ([repo]);
CREATE INDEX [idx_issues_milestone]
    ON [issues] ([milestone]);
CREATE INDEX [idx_issues_assignee]
    ON [issues] ([assignee]);
CREATE INDEX [idx_issues_user]
    ON [issues] ([user]);
Powered by Datasette · Queries took 49.437ms · About: xarray-datasette