issues: 977544678
This data as json
id | node_id | number | title | user | state | locked | assignee | milestone | comments | created_at | updated_at | closed_at | author_association | active_lock_reason | draft | pull_request | body | reactions | performed_via_github_app | state_reason | repo | type |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
977544678 | MDU6SXNzdWU5Nzc1NDQ2Nzg= | 5733 | Shoudn't `assert_allclose` transpose datasets? | 14314623 | open | 0 | 16 | 2021-08-23T22:55:12Z | 2024-05-01T15:27:21Z | CONTRIBUTOR | I am trying to compare two datasets, one of which has possibly transposed dimensions on a data variable.
```AssertionError Traceback (most recent call last) <ipython-input-7-58cd53174a1e> in <module> ----> 1 xr.testing.assert_allclose(ds1, ds2)
/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/testing.py in assert_allclose(a, b, rtol, atol, decode_bytes) 169 a.variables, b.variables, compat=compat_variable 170 ) --> 171 assert allclose, formatting.diff_dataset_repr(a, b, compat=equiv) 172 else: 173 raise TypeError("{} not supported by assertion comparison".format(type(a))) AssertionError: Left and right Dataset objects are not close Differing data variables: L data (x, y) float64 0.8589 0.09264 0.0264 ... 0.1039 0.3685 0.3983 R data (y, x) float64 0.8589 0.8792 0.8433 0.6952 ... 0.3664 0.2214 0.3983 ``` Simply transposing
Since most of the other xarray operations are 'transpose-safe' ( Environment: Output of <tt>xr.show_versions()</tt>INSTALLED VERSIONS ------------------ commit: None python: 3.8.8 | packaged by conda-forge | (default, Feb 20 2021, 16:22:27) [GCC 9.3.0] python-bits: 64 OS: Linux OS-release: 5.4.109+ machine: x86_64 processor: x86_64 byteorder: little LC_ALL: C.UTF-8 LANG: C.UTF-8 LOCALE: ('en_US', 'UTF-8') libhdf5: 1.10.6 libnetcdf: 4.7.4 xarray: 0.19.0 pandas: 1.2.4 numpy: 1.20.2 scipy: 1.6.2 netCDF4: 1.5.6 pydap: installed h5netcdf: 0.11.0 h5py: 3.2.1 Nio: None zarr: 2.7.1 cftime: 1.4.1 nc_time_axis: 1.2.0 PseudoNetCDF: None rasterio: 1.2.2 cfgrib: 0.9.9.0 iris: None bottleneck: 1.3.2 dask: 2021.04.1 distributed: 2021.04.1 matplotlib: 3.4.1 cartopy: 0.19.0 seaborn: None numbagg: None pint: 0.17 setuptools: 49.6.0.post20210108 pip: 20.3.4 conda: None pytest: None IPython: 7.22.0 sphinx: None |
{ "url": "https://api.github.com/repos/pydata/xarray/issues/5733/reactions", "total_count": 0, "+1": 0, "-1": 0, "laugh": 0, "hooray": 0, "confused": 0, "heart": 0, "rocket": 0, "eyes": 0 } |
13221727 | issue |