issues: 935747115
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id | node_id | number | title | user | state | locked | assignee | milestone | comments | created_at | updated_at | closed_at | author_association | active_lock_reason | draft | pull_request | body | reactions | performed_via_github_app | state_reason | repo | type |
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935747115 | MDU6SXNzdWU5MzU3NDcxMTU= | 5565 | Tests fail when no SciPy installed | 33122845 | closed | 0 | 0 | 2021-07-02T12:58:49Z | 2021-07-17T21:05:13Z | 2021-07-17T21:05:13Z | CONTRIBUTOR | What happened: Tests failed, also reported in #5564 and relatd to #5559 What you expected to happen: Minimal Complete Verifiable Example:
self = <xarray.tests.test_backends.TestH5NetCDFFileObject object at 0x7f051a6b59a0>
/mnt/e/Git/xarray/xarray/tests/test_backends.py:2887: /mnt/e/Git/xarray/xarray/backends/api.py:483: in open_dataset backend = plugins.get_backend(engine) engine = 'scipy'
/mnt/e/Git/xarray/xarray/backends/plugins.py:156: ValueError ________ test_3641 ___________ [gw0] linux -- Python 3.9.5 /home/joeperdefloep/miniconda3/envs/xr-dev/bin/python3.9
/mnt/e/Git/xarray/xarray/tests/test_interp.py:733: /mnt/e/Git/xarray/xarray/core/dataarray.py:1687: in interp ds = self._to_temp_dataset().interp( /mnt/e/Git/xarray/xarray/core/dataset.py:3146: in interp variables[name] = missing.interp(var, var_indexers, method, kwargs) /mnt/e/Git/xarray/xarray/core/missing.py:633: in interp interped = interp_func( /mnt/e/Git/xarray/xarray/core/missing.py:752: in interp_func return _interpnd(var, x, new_x, func, kwargs) /mnt/e/Git/xarray/xarray/core/missing.py:770: in _interpnd return _interp1d(var, x, new_x, func, kwargs) /mnt/e/Git/xarray/xarray/core/missing.py:758: in _interp1d rslt = func(x, var, assume_sorted=True, kwargs)(np.ravel(new_x)) self = <[AttributeError("'ScipyInterpolator' object has no attribute 'method'") raised in repr()] ScipyInterpolator object at 0x7f1aa547fc40> xi = <xarray.IndexVariable 'time' (time: 2)> array([0.00000e+00, 1.57788e+19]), yi = array([0, 1]), method = 'linear' fill_value = None, assume_sorted = True, copy = False, bounds_error = False, order = None, kwargs = {}
/mnt/e/Git/xarray/xarray/core/missing.py:129: ModuleNotFoundError =================================================== warnings summary =================================================== xarray/tests/test_dataarray.py::TestReduce1D::test_min[x3-5-2-1] xarray/tests/test_dataarray.py::TestReduce1D::test_max[x3-5-2-1] xarray/tests/test_dataarray.py::TestReduce2D::test_min[x2-minindex2-maxindex2-nanindex2] xarray/tests/test_dataarray.py::TestReduce2D::test_max[x2-minindex2-maxindex2-nanindex2] /home/joeperdefloep/miniconda3/envs/xr-dev/lib/python3.9/site-packages/numpy/core/fromnumeric.py:86: RuntimeWarning: invalid value encountered in reduce return ufunc.reduce(obj, axis, dtype, out, **passkwargs) -- Docs: https://docs.pytest.org/en/stable/warnings.html =============================================== short test summary info ================================================ FAILED xarray/tests/test_backends.py::TestH5NetCDFFileObject::test_open_fileobj - ValueError: unrecognized engine sci... FAILED xarray/tests/test_interp.py::test_3641 - ModuleNotFoundError: No module named 'scipy' ============= 2 failed, 8243 passed, 3776 skipped, 29 xfailed, 26 xpassed, 4 warnings in 229.01s (0:03:49) ============= ``` Anything else we need to know?: Environment: Output of <tt>xr.show_versions()</tt>INSTALLED VERSIONS ------------------ commit: a874739378f28f68c4e184c5bf1cebdb749dc836 python: 3.9.5 | packaged by conda-forge | (default, Jun 19 2021, 00:32:32) [GCC 9.3.0] python-bits: 64 OS: Linux OS-release: 4.19.128-microsoft-standard machine: x86_64 processor: x86_64 byteorder: little LC_ALL: None LANG: C.UTF-8 LOCALE: ('en_US', 'UTF-8') libhdf5: 1.12.0 libnetcdf: 4.7.4 xarray: 0.18.2.dev69+gc472f8a4 pandas: 1.2.5 numpy: 1.21.0 scipy: None netCDF4: 1.5.7 pydap: None h5netcdf: 0.11.0 h5py: 3.3.0 Nio: None zarr: None cftime: 1.5.0 nc_time_axis: None PseudoNetCDF: None rasterio: None cfgrib: None iris: None bottleneck: None dask: None distributed: None matplotlib: None cartopy: None seaborn: None numbagg: None pint: None setuptools: 49.6.0.post20210108 pip: 21.1.3 conda: None pytest: 6.2.4 IPython: None sphinx: None |
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completed | 13221727 | issue |