issues: 432019600

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id node_id number title user state locked assignee milestone comments created_at updated_at closed_at author_association active_lock_reason draft pull_request body reactions performed_via_github_app state_reason repo type
432019600 MDU6SXNzdWU0MzIwMTk2MDA= 2887 Safely open / close netCDF files without resource locking 6815844 closed 0     9 2019-04-11T13:19:45Z 2019-05-16T15:28:30Z 2019-05-16T15:28:30Z MEMBER      

Code Sample, a copy-pastable example if possible

(essentially the same to #1629)

Opening netCDF file via xr.open_dataset locks a resource, preventing to write a file with the same name (as pointed out and answered as an expected behavior in #1629). ```python import xarray as xr ds = xr.Dataset({'var': ('x', [0, 1, 2])}) ds.to_netcdf('test.nc')

ds_read = xr.open_dataset('test.nc') ds.to_netcdf('test.nc') # -> PermissionError python ds_read = xr.open_dataset('test.nc').load() ds.to_netcdf('test.nc') # -> PermissionError python ds_read = xr.open_dataset('test.nc').load() ds_read.close() ds.to_netcdf('test.nc') # no error ```

Problem description

Another program cannot write the same netCDF file that xarray has opened, unless close method is not called.

-- EDIT --

close() method does not return the object, thus it cannot be put in the chain call, such as python some_function(xr.open_dataset('test.nc').close())

It is understandable when we do not want to load the entire file into the memory. However, sometimes I want to read the file that will be updated soon by another program. Also, I think that many users who are not accustomed to netCDF may expect this behavior (as np.loadtxt does) and will be surprised after getting PermissionError.

I think it would be nice to have an option such as load_all=True or even make it a default?

Expected Output

No error

Output of xr.show_versions()

# Paste the output here xr.show_versions() here INSTALLED VERSIONS ------------------ commit: None python: 3.7.1 (default, Oct 23 2018, 19:19:42) [GCC 7.3.0] python-bits: 64 OS: Linux OS-release: 4.15.0-1035-oem machine: x86_64 processor: x86_64 byteorder: little LC_ALL: None LANG: en_US.UTF-8 LOCALE: en_US.UTF-8 libhdf5: 1.10.2 libnetcdf: 4.6.1 xarray: 0.12.0+11.g7d0e895f.dirty pandas: 0.23.4 numpy: 1.15.4 scipy: 1.2.0 netCDF4: 1.4.2 pydap: None h5netcdf: None h5py: 2.8.0 Nio: None zarr: None cftime: 1.0.2.1 nc_time_axis: None PseudonetCDF: None rasterio: None cfgrib: None iris: None bottleneck: 1.2.1 dask: 1.0.0 distributed: 1.25.0 matplotlib: 2.2.2 cartopy: None seaborn: 0.9.0 setuptools: 40.5.0 pip: 18.1 conda: None pytest: 4.0.1 IPython: 7.1.1 sphinx: 1.8.2 
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   completed 13221727 issue

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