issues: 228023777
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id | node_id | number | title | user | state | locked | assignee | milestone | comments | created_at | updated_at | closed_at | author_association | active_lock_reason | draft | pull_request | body | reactions | performed_via_github_app | state_reason | repo | type |
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228023777 | MDU6SXNzdWUyMjgwMjM3Nzc= | 1405 | Using uint64 for Dataset indexing gives ValueError | 500246 | closed | 0 | 2 | 2017-05-11T15:05:20Z | 2017-10-23T07:50:29Z | 2017-10-23T07:50:29Z | CONTRIBUTOR | Trying to index a ``` In [13]: import xarray In [14]: ds = xarray.Dataset({"A": (("x", "y"), arange(5*6).reshape(5,6))}) In [15]: ds[{"x": numpy.array([0], dtype="int64")}] Out[15]: <xarray.Dataset> Dimensions: (x: 1, y: 6) Dimensions without coordinates: x, y Data variables: A (x, y) int64 0 1 2 3 4 5 In [16]: ds[{"x": numpy.array([0], dtype="uint64")}]ValueError Traceback (most recent call last) <ipython-input-16-4cf23af0967e> in <module>() ----> 1 ds[{"x": numpy.array([0], dtype="uint64")}] /dev/shm/gerrit/venv/stable-3.5/lib/python3.5/site-packages/xarray/core/dataset.py in getitem(self, key) 722 """ 723 if utils.is_dict_like(key): --> 724 return self.isel(**key) 725 726 if hashable(key): /dev/shm/gerrit/venv/stable-3.5/lib/python3.5/site-packages/xarray/core/dataset.py in isel(self, drop, indexers) 1147 for name, var in iteritems(self._variables): 1148 var_indexers = dict((k, v) for k, v in indexers if k in var.dims) -> 1149 new_var = var.isel(var_indexers) 1150 if not (drop and name in var_indexers): 1151 variables[name] = new_var /dev/shm/gerrit/venv/stable-3.5/lib/python3.5/site-packages/xarray/core/variable.py in isel(self, **indexers) 547 if dim in indexers: 548 key[i] = indexers[dim] --> 549 return self[tuple(key)] 550 551 def squeeze(self, dim=None): /dev/shm/gerrit/venv/stable-3.5/lib/python3.5/site-packages/xarray/core/variable.py in getitem(self, key) 377 dims = tuple(dim for k, dim in zip(key, self.dims) 378 if not isinstance(k, integer_types)) --> 379 values = self._indexable_data[key] 380 # orthogonal indexing should ensure the dimensionality is consistent 381 if hasattr(values, 'ndim'): /dev/shm/gerrit/venv/stable-3.5/lib/python3.5/site-packages/xarray/core/indexing.py in getitem(self, key) 467 468 def getitem(self, key): --> 469 key = self._convert_key(key) 470 return self._ensure_ndarray(self.array[key]) 471 /dev/shm/gerrit/venv/stable-3.5/lib/python3.5/site-packages/xarray/core/indexing.py in _convert_key(self, key) 454 if any(not isinstance(k, integer_types + (slice,)) for k in key): 455 # key would trigger fancy indexing --> 456 key = orthogonal_indexer(key, self.shape) 457 return key 458 /dev/shm/gerrit/venv/stable-3.5/lib/python3.5/site-packages/xarray/core/indexing.py in orthogonal_indexer(key, shape) 78 """ 79 # replace Ellipsis objects with slices ---> 80 key = list(canonicalize_indexer(key, len(shape))) 81 # replace 1d arrays and slices with broadcast compatible arrays 82 # note: we treat integers separately (instead of turning them into 1d /dev/shm/gerrit/venv/stable-3.5/lib/python3.5/site-packages/xarray/core/indexing.py in canonicalize_indexer(key, ndim) 66 return indexer 67 ---> 68 return tuple(canonicalize(k) for k in expanded_indexer(key, ndim)) 69 70 /dev/shm/gerrit/venv/stable-3.5/lib/python3.5/site-packages/xarray/core/indexing.py in <genexpr>(.0) 66 return indexer 67 ---> 68 return tuple(canonicalize(k) for k in expanded_indexer(key, ndim)) 69 70 /dev/shm/gerrit/venv/stable-3.5/lib/python3.5/site-packages/xarray/core/indexing.py in canonicalize(indexer) 63 'array indexing; all subkeys must be ' 64 'slices, integers or sequences of ' ---> 65 'integers or Booleans' % indexer) 66 return indexer 67 ValueError: invalid subkey array([0], dtype=uint64) for integer based array indexing; all subkeys must be slices, integers or sequences of integers or Booleans ``` |
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