issues: 1044363666
This data as json
| id | node_id | number | title | user | state | locked | assignee | milestone | comments | created_at | updated_at | closed_at | author_association | active_lock_reason | draft | pull_request | body | reactions | performed_via_github_app | state_reason | repo | type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1044363666 | PR_kwDOAMm_X84uE2qZ | 5936 | Fix a missing @requires_zarr in tests | 490531 | closed | 0 | 3 | 2021-11-04T04:49:39Z | 2021-11-04T10:12:58Z | 2021-11-04T10:12:46Z | CONTRIBUTOR | 0 | pydata/xarray/pulls/5936 | When zarr is not available, this test fails with Full trace``` __________________________ test_zarr_storage_options ___________________________ @requires_fsspec def test_zarr_storage_options(): pytest.importorskip("aiobotocore") ds = create_test_data() store_target = "memory://test.zarr" > ds.to_zarr(store_target, storage_options={"test": "zarr_write"}) /build/python-xarray/src/xarray-0.20.0/xarray/tests/test_backends.py:2406: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /build/python-xarray/src/xarray-0.20.0/xarray/core/dataset.py:2037: in to_zarr return to_zarr( /build/python-xarray/src/xarray-0.20.0/xarray/backends/api.py:1391: in to_zarr zstore = backends.ZarrStore.open_group( _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ cls = <class 'xarray.backends.zarr.ZarrStore'> store = <fsspec.mapping.FSMap object at 0x7f074691cfd0>, mode = 'w-' synchronizer = None, group = None, consolidated = False consolidate_on_close = True, chunk_store = None, storage_options = None append_dim = None, write_region = None, safe_chunks = True, stacklevel = 4 @classmethod def open_group( cls, store, mode="r", synchronizer=None, group=None, consolidated=False, consolidate_on_close=False, chunk_store=None, storage_options=None, append_dim=None, write_region=None, safe_chunks=True, stacklevel=2, ): # zarr doesn't support pathlib.Path objects yet. zarr-python#601 if isinstance(store, os.PathLike): store = os.fspath(store) open_kwargs = dict( mode=mode, synchronizer=synchronizer, path=group, ) open_kwargs["storage_options"] = storage_options if chunk_store: open_kwargs["chunk_store"] = chunk_store if consolidated is None: consolidated = False if consolidated is None: try: zarr_group = zarr.open_consolidated(store, **open_kwargs) except KeyError: warnings.warn( "Failed to open Zarr store with consolidated metadata, " "falling back to try reading non-consolidated metadata. " "This is typically much slower for opening a dataset. " "To silence this warning, consider:\n" "1. Consolidating metadata in this existing store with " "zarr.consolidate_metadata().\n" "2. Explicitly setting consolidated=False, to avoid trying " "to read consolidate metadata, or\n" "3. Explicitly setting consolidated=True, to raise an " "error in this case instead of falling back to try " "reading non-consolidated metadata.", RuntimeWarning, stacklevel=stacklevel, ) zarr_group = zarr.open_group(store, **open_kwargs) elif consolidated: # TODO: an option to pass the metadata_key keyword zarr_group = zarr.open_consolidated(store, **open_kwargs) else: > zarr_group = zarr.open_group(store, **open_kwargs) E NameError: name 'zarr' is not defined /build/python-xarray/src/xarray-0.20.0/xarray/backends/zarr.py:386: NameError ``` |
{
"url": "https://api.github.com/repos/pydata/xarray/issues/5936/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} |
13221727 | pull |