id,node_id,number,title,user,state,locked,assignee,milestone,comments,created_at,updated_at,closed_at,author_association,active_lock_reason,draft,pull_request,body,reactions,performed_via_github_app,state_reason,repo,type 1339921253,I_kwDOAMm_X85P3ZNl,6919,Parallel read with MPI,8100801,closed,0,,,4,2022-08-16T07:19:14Z,2023-09-12T15:16:32Z,2023-09-12T15:16:31Z,NONE,,,,"### Is your feature request related to a problem? Is it possible to somehow extend xarray to use MPI I/O? ### Describe the solution you'd like We would need to know the offset from where the actual data starts within the file. Is there a way of retrieving that? Disclaimer: I am not an expert of NetCDF format - so, apologies if the question is trivial! ### Describe alternatives you've considered _No response_ ### Additional context _No response_","{""url"": ""https://api.github.com/repos/pydata/xarray/issues/6919/reactions"", ""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",,completed,13221727,issue 577068248,MDU6SXNzdWU1NzcwNjgyNDg=,3842,Mixed datatypes Dataset.to_netcdf(),8100801,closed,0,,,3,2020-03-06T17:16:13Z,2020-03-23T15:12:18Z,2020-03-23T05:38:31Z,NONE,,,," Not sure if this is intended, but when I try to save a Dataset to netCDF using Dataset.to_netcdf(), it produces the following error: ValueError: could not convert string to float: 'a' This seems to be due to forcing datatypes to be equal to the datatype of the first column encountered. See below a simple working example. #### MCVE Code Sample ```python import pandas as pd import xarray as xr df = pd.DataFrame() df['Values' ] = [1.0,2.0,3.0] df['Strings'] = ['a','b','c'] da = xr.DataArray(df) ds = xr.Dataset() ds['A'] = da ds.to_netcdf('A.nc') ``` #### Expected Output Gianmarcos-MacBook-Pro-2:examples gian$ python3 test_xarray.py Traceback (most recent call last): File ""test_xarray.py"", line 11, in ds.to_netcdf('A.nc') File ""/usr/local/lib/python3.7/site-packages/xarray/core/dataset.py"", line 1232, in to_netcdf compute=compute) File ""/usr/local/lib/python3.7/site-packages/xarray/backends/api.py"", line 749, in to_netcdf unlimited_dims=unlimited_dims) File ""/usr/local/lib/python3.7/site-packages/xarray/backends/api.py"", line 792, in dump_to_store unlimited_dims=unlimited_dims) File ""/usr/local/lib/python3.7/site-packages/xarray/backends/common.py"", line 261, in store variables, attributes = self.encode(variables, attributes) File ""/usr/local/lib/python3.7/site-packages/xarray/backends/common.py"", line 347, in encode variables, attributes = cf_encoder(variables, attributes) File ""/usr/local/lib/python3.7/site-packages/xarray/conventions.py"", line 605, in cf_encoder for k, v in iteritems(variables)) File ""/usr/local/lib/python3.7/site-packages/xarray/conventions.py"", line 605, in for k, v in iteritems(variables)) File ""/usr/local/lib/python3.7/site-packages/xarray/conventions.py"", line 241, in encode_cf_variable var = ensure_dtype_not_object(var, name=name) File ""/usr/local/lib/python3.7/site-packages/xarray/conventions.py"", line 201, in ensure_dtype_not_object data = _copy_with_dtype(data, dtype=_infer_dtype(data, name)) File ""/usr/local/lib/python3.7/site-packages/xarray/conventions.py"", line 160, in _copy_with_dtype result[...] = data ValueError: could not convert string to float: 'a' #### Problem Description It should be able to save the file into netcdf format? #### Versions
Output of `xr.show_versions()` INSTALLED VERSIONS ------------------ commit: None python: 3.7.6 (default, Jan 7 2020, 19:34:32) [Clang 11.0.0 (clang-1100.0.33.16)] python-bits: 64 OS: Darwin OS-release: 19.2.0 machine: x86_64 processor: i386 byteorder: little LC_ALL: None LANG: C LOCALE: None.UTF-8 libhdf5: 1.10.2 libnetcdf: 4.4.1.1 xarray: 0.11.2 pandas: 0.24.2 numpy: 1.16.2 scipy: 1.1.0 netCDF4: 1.4.3.2 pydap: None h5netcdf: None h5py: 2.8.0 Nio: None zarr: None cftime: 1.0.3.4 PseudonetCDF: None rasterio: None cfgrib: None iris: None bottleneck: 1.2.1 cyordereddict: None dask: 0.19.4 distributed: None matplotlib: 3.0.2 cartopy: None seaborn: 0.9.0 setuptools: 42.0.2 pip: 20.0.2 conda: None pytest: 3.8.2 IPython: 7.1.1 sphinx: 1.8.4
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