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  • gabriel-abrahao · 4 ✖

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799635182 https://github.com/pydata/xarray/issues/3185#issuecomment-799635182 https://api.github.com/repos/pydata/xarray/issues/3185 MDEyOklzc3VlQ29tbWVudDc5OTYzNTE4Mg== gabriel-abrahao 30908904 2021-03-15T18:10:28Z 2021-03-15T18:10:28Z CONTRIBUTOR

Maybe this can be closed now, since #5021 changed the docs?

@naught101 Looks like those coordinates are now in the order as declared in the affine package (since rasterio >= 1.0). See also: https://rasterio.readthedocs.io/en/latest/topics/migrating-to-v1.html.

All coordinates are created correctly, so from my point of view, only the docs here have to be changed.

python from affine import Affine da = xr.open_rasterio('path_to_file.tif') transform = Affine(*da.attrs['transform']) nx, ny = da.sizes['x'], da.sizes['y'] x, y = np.meshgrid(np.arange(nx)+0.5, np.arange(ny)+0.5) * transform

 
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   open_rasterio does not read coordinates from netCDF file properly with netCDF4>=1.4.2 477081946
799064102 https://github.com/pydata/xarray/pull/5021#issuecomment-799064102 https://api.github.com/repos/pydata/xarray/issues/5021 MDEyOklzc3VlQ29tbWVudDc5OTA2NDEwMg== gabriel-abrahao 30908904 2021-03-15T03:27:14Z 2021-03-15T03:27:14Z CONTRIBUTOR

you could also use the CI to verify the changes (the doctests CI is pretty fast), but as I said we can leave that to a new PR.

Unless someone else has any comments I'll merge this tomorrow.

Just did that, thanks! Is there a way to make the CI run just the check I want it to?

I'm not sure if every doctest has to import xarray as xr and import numpy as np, so I added those just in case and it's passing.

Also, right multiplying matrices will be deprecated in numpy, so now transform is on the left side.

 
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   GH5005 fix documentation on open_rasterio 828352998
799040308 https://github.com/pydata/xarray/pull/5021#issuecomment-799040308 https://api.github.com/repos/pydata/xarray/issues/5021 MDEyOklzc3VlQ29tbWVudDc5OTA0MDMwOA== gabriel-abrahao 30908904 2021-03-15T02:03:37Z 2021-03-15T02:03:37Z CONTRIBUTOR

@gabriel-abrahao, do you want to try converting the code block to doctest? Otherwise this looks good to me and should be ready for merging.

I tried, but building the documentation is failing on both my Linux computers just like in #4257 , so unfortunately I can't make it. 

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   GH5005 fix documentation on open_rasterio 828352998
729306620 https://github.com/pydata/xarray/issues/1408#issuecomment-729306620 https://api.github.com/repos/pydata/xarray/issues/1408 MDEyOklzc3VlQ29tbWVudDcyOTMwNjYyMA== gabriel-abrahao 30908904 2020-11-18T00:56:45Z 2020-11-18T00:56:45Z CONTRIBUTOR

As a related issue, we could use an option for .sel to keep the selected variable as a singleton coordinate (an array of shape (1,)) instead of making it a scalar. 

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   .sel does not keep selected coordinate value in case with MultiIndex 228295383

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