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- Dask error on xarray.corr · 5 ✖
| id | html_url | issue_url | node_id | user | created_at | updated_at ▲ | author_association | body | reactions | performed_via_github_app | issue |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 902775531 | https://github.com/pydata/xarray/issues/5715#issuecomment-902775531 | https://api.github.com/repos/pydata/xarray/issues/5715 | IC_kwDOAMm_X841z0Lr | dcherian 2448579 | 2021-08-20T15:29:16Z | 2021-08-20T15:29:16Z | MEMBER | Thanks @Gijom this is a dupe of https://github.com/pydata/xarray/issues/3391 Please send your changes in a pull request, we'd be happy to merge it after reviewing. Thank you! |
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Dask error on xarray.corr 974488736 | |
| 902772011 | https://github.com/pydata/xarray/issues/5715#issuecomment-902772011 | https://api.github.com/repos/pydata/xarray/issues/5715 | IC_kwDOAMm_X841zzUr | max-sixty 5635139 | 2021-08-20T15:23:49Z | 2021-08-20T15:23:49Z | MEMBER | That sounds great @Gijom ! Thanks for working through that. A PR would be welcome! In the tests, we should be running this outside a |
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Dask error on xarray.corr 974488736 | |
| 902657635 | https://github.com/pydata/xarray/issues/5715#issuecomment-902657635 | https://api.github.com/repos/pydata/xarray/issues/5715 | IC_kwDOAMm_X841zXZj | Gijom 9466648 | 2021-08-20T12:30:19Z | 2021-08-20T12:30:33Z | CONTRIBUTOR | I had a look to it this morning and I think I managed to solve the issue by replacing the calls to For (successful) testing I used the same code as above plus the following: ```python ds_dask = ds.chunk({"t": 10}) yy = xr.corr(ds['y'], ds['y']).to_numpy() yy_dask = xr.corr(ds_dask['y'], ds_dask['y']).to_numpy() yx = xr.corr(ds['y'], ds['x']).to_numpy() yx_dask = xr.corr(ds_dask['y'], ds_dask['x']).to_numpy() np.testing.assert_allclose(yy, yy_dask), "YY: {} is different from {}".format(yy, yy_dask) np.testing.assert_allclose(yx, yx_dask), "YX: {} is different from {}".format(yx, yx_dask) ``` The results are not exactly identical but almost which is probably due to numerical approximations of multiple computations in the dask case. I also tested the correlation of simple DataArrays without dask installed and the result seem coherent (close to 0 for uncorrelated data and very close to 1 when correlating identical variables). Should I make a pull request ? Should I implement this test ? Any others ? |
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Dask error on xarray.corr 974488736 | |
| 902516397 | https://github.com/pydata/xarray/issues/5715#issuecomment-902516397 | https://api.github.com/repos/pydata/xarray/issues/5715 | IC_kwDOAMm_X841y06t | Gijom 9466648 | 2021-08-20T08:09:46Z | 2021-08-20T08:10:50Z | CONTRIBUTOR | The responsible code for the error originally comes from the call to 4. Compute covariance along the given dimN.B.
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Dask error on xarray.corr 974488736 | |
| 902281605 | https://github.com/pydata/xarray/issues/5715#issuecomment-902281605 | https://api.github.com/repos/pydata/xarray/issues/5715 | IC_kwDOAMm_X841x7mF | max-sixty 5635139 | 2021-08-19T22:06:06Z | 2021-08-19T22:06:06Z | MEMBER | Thanks @Gijom , I can repro. I think the fix should be fairly easy, if someone wants to take a swing. I'm not sure why the existing tests don't cover it. |
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Dask error on xarray.corr 974488736 |
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