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  • IndexError when calling load() on netCDF file accessed via opendap · 5 ✖
id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
1074099378 https://github.com/pydata/xarray/issues/4353#issuecomment-1074099378 https://api.github.com/repos/pydata/xarray/issues/4353 IC_kwDOAMm_X85ABXSy spencerahill 6200806 2022-03-21T16:14:10Z 2022-03-21T16:14:10Z CONTRIBUTOR

@btickell sorry, I basically haven't used this data since that last post, so I don't recall exactly. But I believe I just was able to download it and work with it locally rather than using opendap.

 
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   IndexError when calling load() on netCDF file accessed via opendap 681864788
1072805898 https://github.com/pydata/xarray/issues/4353#issuecomment-1072805898 https://api.github.com/repos/pydata/xarray/issues/4353 IC_kwDOAMm_X84_8bgK btickell 13987230 2022-03-18T21:18:06Z 2022-03-18T21:18:06Z NONE

@spencerahill I see this is quite an old issue at this point but I am using a similar data source and am having the same error. What were you able to do to access your relevant data?

 
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   IndexError when calling load() on netCDF file accessed via opendap 681864788
683461276 https://github.com/pydata/xarray/issues/4353#issuecomment-683461276 https://api.github.com/repos/pydata/xarray/issues/4353 MDEyOklzc3VlQ29tbWVudDY4MzQ2MTI3Ng== spencerahill 6200806 2020-08-30T19:37:33Z 2020-08-30T19:37:33Z CONTRIBUTOR

Thanks @dcherian. Note that I was able to access the subset of this dataset that I need via other means, so this is no longer important for me. So feel free to close if it doesn't seem worth the trouble.

 
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   IndexError when calling load() on netCDF file accessed via opendap 681864788
683020748 https://github.com/pydata/xarray/issues/4353#issuecomment-683020748 https://api.github.com/repos/pydata/xarray/issues/4353 MDEyOklzc3VlQ29tbWVudDY4MzAyMDc0OA== dcherian 2448579 2020-08-28T18:12:06Z 2020-08-28T18:12:06Z MEMBER

netCDF4 is throwing an error:

```

IndexError Traceback (most recent call last) ~/miniconda3/envs/ensinoo/lib/python3.7/site-packages/xarray/backends/netCDF4_.py in _getitem(self, key) 84 original_array = self.get_array(needs_lock=False) ---> 85 array = getitem(original_array, key) 86 except IndexError:

~/miniconda3/envs/ensinoo/lib/python3.7/site-packages/xarray/backends/common.py in robust_getitem(array, key, catch, max_retries, initial_delay) 53 try: ---> 54 return array[key] 55 except catch:

netCDF4/_netCDF4.pyx in netCDF4._netCDF4.Variable.getitem()

netCDF4/_netCDF4.pyx in netCDF4._netCDF4.Variable._get()

IndexError: index exceeds dimension bounds ```

for this indexing key : (slice(None, None, None), slice(None, None, None), slice(None, None, None), slice(None, None, None), slice(None, None, None))

which makes no sense.

 
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   IndexError when calling load() on netCDF file accessed via opendap 681864788
676414924 https://github.com/pydata/xarray/issues/4353#issuecomment-676414924 https://api.github.com/repos/pydata/xarray/issues/4353 MDEyOklzc3VlQ29tbWVudDY3NjQxNDkyNA== spencerahill 6200806 2020-08-19T14:06:07Z 2020-08-19T14:06:07Z CONTRIBUTOR

I should add: the file in question is one that somebody else (who is on vacation) works with via xarray, or at least has in the past. So that makes me wonder if this behavior is a regression in 0.16.0.

 
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   IndexError when calling load() on netCDF file accessed via opendap 681864788

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