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  • sjvrijn · 3 ✖

issue 1

  • local build of docs fails with OSError: [UT_PARSE] Failed to open UDUNITS-2 XML unit database · 3 ✖

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id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
664460211 https://github.com/pydata/xarray/issues/4257#issuecomment-664460211 https://api.github.com/repos/pydata/xarray/issues/4257 MDEyOklzc3VlQ29tbWVudDY2NDQ2MDIxMQ== sjvrijn 8833517 2020-07-27T15:19:07Z 2020-07-27T15:19:07Z CONTRIBUTOR

@ocefpaf Thanks for trying anyway

 
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   local build of docs fails with OSError: [UT_PARSE] Failed to open UDUNITS-2 XML unit database 664458864
664456140 https://github.com/pydata/xarray/issues/4257#issuecomment-664456140 https://api.github.com/repos/pydata/xarray/issues/4257 MDEyOklzc3VlQ29tbWVudDY2NDQ1NjE0MA== sjvrijn 8833517 2020-07-27T15:12:05Z 2020-07-27T15:12:05Z CONTRIBUTOR

@ocefpaf : (xarray-docs) rijnsjvan@turbine:~$ echo $0 -bash (xarray-docs) rijnsjvan@turbine:~$ echo $UDUNITS2_XML_PATH /home/rijnsjvan/miniconda3/envs/xarray-docs/share/udunits/udunits2.xml

 
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   local build of docs fails with OSError: [UT_PARSE] Failed to open UDUNITS-2 XML unit database 664458864
664434116 https://github.com/pydata/xarray/issues/4257#issuecomment-664434116 https://api.github.com/repos/pydata/xarray/issues/4257 MDEyOklzc3VlQ29tbWVudDY2NDQzNDExNg== sjvrijn 8833517 2020-07-27T14:34:53Z 2020-07-27T14:34:53Z CONTRIBUTOR

@ocefpaf @dcherian I'm guessing it's some bad package install too, but that surprises me since it's a fresh miniconda install to begin with... Haven't tested miniconda vs anaconda yet.

Just pulled from upstream and recreated the environment, docs make error still persists.

Here are my .condarc: (xarray-docs) rijnsjvan@turbine:~$ cat .condarc channels: - intel - defaults auto_activate_base: false

and conda list: ``` (xarray-docs) rijnsjvan@turbine:~$ conda list

packages in environment at /home/rijnsjvan/miniconda3/envs/xarray-docs:

Name Version Build Channel

_libgcc_mutex 0.1 conda_forge conda-forge _openmp_mutex 4.5 0_gnu conda-forge affine 2.3.0 py_0 conda-forge alabaster 0.7.12 py_0 conda-forge antlr-python-runtime 4.7.2 py38_1001 conda-forge asciitree 0.3.3 py_2 conda-forge attrs 19.3.0 py_0 conda-forge babel 2.8.0 py_0 conda-forge backcall 0.2.0 pyh9f0ad1d_0 conda-forge bleach 3.1.5 pyh9f0ad1d_0 conda-forge bokeh 2.1.1 py38h32f6830_0 conda-forge boost-cpp 1.72.0 h8e57a91_0 conda-forge bottleneck 1.3.2 py38h8790de6_1 conda-forge brotlipy 0.7.0 py38h1e0a361_1000 conda-forge bzip2 1.0.8 h516909a_2 conda-forge ca-certificates 2020.6.20 hecda079_0 conda-forge cairo 1.16.0 hcf35c78_1003 conda-forge cartopy 0.18.0 py38h172510d_0 conda-forge certifi 2020.6.20 py38h32f6830_0 conda-forge cf-units 2.1.4 py38h8790de6_0 conda-forge cffi 1.14.1 py38h5bae8af_0 conda-forge cfgrib 0.9.8.3 py_0 conda-forge cfitsio 3.470 hce51eda_6 conda-forge cftime 1.2.1 py38h8790de6_0 conda-forge chardet 3.0.4 py38h32f6830_1006 conda-forge click 7.1.2 pyh9f0ad1d_0 conda-forge click-plugins 1.1.1 py_0 conda-forge cligj 0.5.0 py_0 conda-forge cloudpickle 1.5.0 py_0 conda-forge cryptography 3.0 py38h766eaa4_0 conda-forge curl 7.71.1 he644dc0_3 conda-forge cycler 0.10.0 py_2 conda-forge cytoolz 0.10.1 py38h516909a_0 conda-forge dask 2.21.0 py_0 conda-forge dask-core 2.21.0 py_0 conda-forge decorator 4.4.2 py_0 conda-forge defusedxml 0.6.0 py_0 conda-forge distributed 2.21.0 py38h32f6830_0 conda-forge docutils 0.16 py38h32f6830_1 conda-forge eccodes 2.18.0 hf05d9b7_0 conda-forge entrypoints 0.3 py38h32f6830_1001 conda-forge expat 2.2.9 he1b5a44_2 conda-forge fasteners 0.14.1 py_3 conda-forge fontconfig 2.13.1 h86ecdb6_1001 conda-forge freetype 2.10.2 he06d7ca_0 conda-forge freexl 1.0.5 h516909a_1002 conda-forge fsspec 0.7.4 py_0 conda-forge gdal 3.0.4 py38h172510d_10 conda-forge geos 3.8.1 he1b5a44_0 conda-forge geotiff 1.6.0 h05acad5_0 conda-forge gettext 0.19.8.1 hc5be6a0_1002 conda-forge giflib 5.2.1 h516909a_2 conda-forge glib 2.65.0 h6f030ca_0 conda-forge h5netcdf 0.8.1 py_0 conda-forge h5py 2.10.0 nompi_py38hfb01d0b_104 conda-forge hdf4 4.2.13 hf30be14_1003 conda-forge hdf5 1.10.6 nompi_h3c11f04_100 conda-forge heapdict 1.0.1 py_0 conda-forge icu 64.2 he1b5a44_1 conda-forge idna 2.10 pyh9f0ad1d_0 conda-forge imagesize 1.2.0 py_0 conda-forge importlib-metadata 1.7.0 py38h32f6830_0 conda-forge importlib_metadata 1.7.0 0 conda-forge ipykernel 5.3.4 py38h23f93f0_0 conda-forge ipython 7.16.1 py38h23f93f0_0 conda-forge ipython_genutils 0.2.0 py_1 conda-forge iris 2.4.0 py38_0 conda-forge jasper 1.900.1 h07fcdf6_1006 conda-forge jedi 0.17.2 py38h32f6830_0 conda-forge jinja2 2.11.2 pyh9f0ad1d_0 conda-forge jpeg 9d h516909a_0 conda-forge json-c 0.13.1 hbfbb72e_1002 conda-forge jsonschema 3.2.0 py38h32f6830_1 conda-forge jupyter_client 6.1.6 py_0 conda-forge jupyter_core 4.6.3 py38h32f6830_1 conda-forge kealib 1.4.13 h33137a7_1 conda-forge kiwisolver 1.2.0 py38hbf85e49_0 conda-forge krb5 1.17.1 hfafb76e_1 conda-forge lcms2 2.11 hbd6801e_0 conda-forge ld_impl_linux-64 2.34 hc38a660_9 conda-forge libaec 1.0.4 he1b5a44_1 conda-forge libblas 3.8.0 17_openblas conda-forge libcblas 3.8.0 17_openblas conda-forge libcurl 7.71.1 hcdd3856_3 conda-forge libdap4 3.20.6 h1d1bd15_1 conda-forge libedit 3.1.20191231 h46ee950_1 conda-forge libffi 3.2.1 he1b5a44_1007 conda-forge libgcc-ng 9.2.0 h24d8f2e_2 conda-forge libgdal 3.0.4 he6a97d6_10 conda-forge libgfortran-ng 7.5.0 hdf63c60_10 conda-forge libgomp 9.2.0 h24d8f2e_2 conda-forge libiconv 1.15 h516909a_1006 conda-forge libkml 1.3.0 hb574062_1011 conda-forge liblapack 3.8.0 17_openblas conda-forge libllvm9 9.0.1 he513fc3_1 conda-forge libnetcdf 4.7.4 nompi_h84807e1_105 conda-forge libopenblas 0.3.10 pthreads_hb3c22a3_4 conda-forge libpng 1.6.37 hed695b0_1 conda-forge libpq 12.3 h5513abc_0 conda-forge libsodium 1.0.17 h516909a_0 conda-forge libspatialite 4.3.0a h2482549_1038 conda-forge libssh2 1.9.0 hab1572f_4 conda-forge libstdcxx-ng 9.2.0 hdf63c60_2 conda-forge libtiff 4.1.0 hc7e4089_6 conda-forge libuuid 2.32.1 h14c3975_1000 conda-forge libwebp-base 1.1.0 h516909a_3 conda-forge libxcb 1.13 h14c3975_1002 conda-forge libxml2 2.9.10 hee79883_0 conda-forge llvmlite 0.33.0 py38h4f45e52_1 conda-forge locket 0.2.0 py_2 conda-forge lz4-c 1.9.2 he1b5a44_1 conda-forge markupsafe 1.1.1 py38h1e0a361_1 conda-forge matplotlib-base 3.3.0 py38h91b0d89_1 conda-forge mistune 0.8.4 py38h1e0a361_1001 conda-forge monotonic 1.5 py_0 conda-forge msgpack-python 1.0.0 py38hbf85e49_1 conda-forge nbconvert 5.6.1 py38h32f6830_1 conda-forge nbformat 5.0.7 py_0 conda-forge nbsphinx 0.7.1 pyh9f0ad1d_0 conda-forge ncurses 6.2 he1b5a44_1 conda-forge netcdf4 1.5.4 nompi_py38hfd55d45_100 conda-forge numba 0.50.1 py38hcb8c335_1 conda-forge numcodecs 0.6.4 py38he1b5a44_0 conda-forge numpy 1.19.1 py38h8854b6b_0 conda-forge olefile 0.46 py_0 conda-forge openjpeg 2.3.1 h981e76c_3 conda-forge openssl 1.1.1g h516909a_0 conda-forge owslib 0.20.0 py_0 conda-forge packaging 20.4 pyh9f0ad1d_0 conda-forge pandas 1.0.5 py38hcb8c335_0 conda-forge pandoc 2.10.1 h516909a_0 conda-forge pandocfilters 1.4.2 py_1 conda-forge parso 0.7.1 pyh9f0ad1d_0 conda-forge partd 1.1.0 py_0 conda-forge patsy 0.5.1 py_0 conda-forge pcre 8.44 he1b5a44_0 conda-forge pexpect 4.8.0 py38h32f6830_1 conda-forge pickleshare 0.7.5 py38h32f6830_1001 conda-forge pillow 7.2.0 py38h9776b28_1 conda-forge pip 20.1.1 py_1 conda-forge pixman 0.38.0 h516909a_1003 conda-forge poppler 0.87.0 h4190859_1 conda-forge poppler-data 0.4.9 1 conda-forge postgresql 12.3 h8573dbc_0 conda-forge proj 7.0.0 h966b41f_5 conda-forge prompt-toolkit 3.0.5 py_1 conda-forge psutil 5.7.2 py38h1e0a361_0 conda-forge pthread-stubs 0.4 h14c3975_1001 conda-forge ptyprocess 0.6.0 py_1001 conda-forge pycparser 2.20 pyh9f0ad1d_2 conda-forge pyepsg 0.4.0 py_0 conda-forge pygments 2.6.1 py_0 conda-forge pyke 1.1.1 py38h32f6830_1002 conda-forge pyopenssl 19.1.0 py_1 conda-forge pyparsing 2.4.7 pyh9f0ad1d_0 conda-forge pyproj 2.6.1.post1 py38h7521cb9_0 conda-forge pyrsistent 0.16.0 py38h1e0a361_0 conda-forge pyshp 2.1.0 py_0 conda-forge pysocks 1.7.1 py38h32f6830_1 conda-forge python 3.8.5 h425cb1d_1_cpython conda-forge python-dateutil 2.8.1 py_0 conda-forge python_abi 3.8 1_cp38 conda-forge pytz 2020.1 pyh9f0ad1d_0 conda-forge pyyaml 5.3.1 py38h1e0a361_0 conda-forge pyzmq 19.0.1 py38ha71036d_0 conda-forge rasterio 1.1.5 py38h033e0f6_0 conda-forge readline 8.0 he28a2e2_2 conda-forge requests 2.24.0 pyh9f0ad1d_0 conda-forge scipy 1.5.2 py38h8c5af15_0 conda-forge seaborn 0.10.1 1 conda-forge seaborn-base 0.10.1 py_1 conda-forge setuptools 49.2.0 py38h32f6830_0 conda-forge shapely 1.7.0 py38hd168ffb_3 conda-forge six 1.15.0 pyh9f0ad1d_0 conda-forge snowballstemmer 2.0.0 py_0 conda-forge snuggs 1.4.7 py_0 conda-forge sortedcontainers 2.2.2 pyh9f0ad1d_0 conda-forge sphinx 3.1.2 py_0 conda-forge sphinx_rtd_theme 0.5.0 pyh9f0ad1d_0 conda-forge sphinxcontrib-applehelp 1.0.2 py_0 conda-forge sphinxcontrib-devhelp 1.0.2 py_0 conda-forge sphinxcontrib-htmlhelp 1.0.3 py_0 conda-forge sphinxcontrib-jsmath 1.0.1 py_0 conda-forge sphinxcontrib-qthelp 1.0.3 py_0 conda-forge sphinxcontrib-serializinghtml 1.1.4 py_0 conda-forge sqlite 3.32.3 hcee41ef_1 conda-forge statsmodels 0.11.1 py38h1e0a361_2 conda-forge tbb 2020.1 hc9558a2_0 conda-forge tblib 1.6.0 py_0 conda-forge testpath 0.4.4 py_0 conda-forge tiledb 1.7.7 h8efa9f0_3 conda-forge tk 8.6.10 hed695b0_0 conda-forge toolz 0.10.0 py_0 conda-forge tornado 6.0.4 py38h1e0a361_1 conda-forge traitlets 4.3.3 py38h32f6830_1 conda-forge typing_extensions 3.7.4.2 py_0 conda-forge tzcode 2020a h516909a_0 conda-forge udunits2 2.2.27.6 h4e0c4b3_1001 conda-forge urllib3 1.25.10 py_0 conda-forge wcwidth 0.2.5 pyh9f0ad1d_0 conda-forge webencodings 0.5.1 py_1 conda-forge wheel 0.34.2 py_1 conda-forge xarray 0.16.0 py_0 conda-forge xerces-c 3.2.2 h8412b87_1004 conda-forge xorg-kbproto 1.0.7 h14c3975_1002 conda-forge xorg-libice 1.0.10 h516909a_0 conda-forge xorg-libsm 1.2.3 h84519dc_1000 conda-forge xorg-libx11 1.6.9 h516909a_0 conda-forge xorg-libxau 1.0.9 h14c3975_0 conda-forge xorg-libxdmcp 1.1.3 h516909a_0 conda-forge xorg-libxext 1.3.4 h516909a_0 conda-forge xorg-libxrender 0.9.10 h516909a_1002 conda-forge xorg-renderproto 0.11.1 h14c3975_1002 conda-forge xorg-xextproto 7.3.0 h14c3975_1002 conda-forge xorg-xproto 7.0.31 h14c3975_1007 conda-forge xz 5.2.5 h516909a_1 conda-forge yaml 0.2.5 h516909a_0 conda-forge zarr 2.4.0 py_0 conda-forge zeromq 4.3.2 he1b5a44_2 conda-forge zict 2.0.0 py_0 conda-forge zipp 3.1.0 py_0 conda-forge zlib 1.2.11 h516909a_1006 conda-forge zstd 1.4.5 h6597ccf_2 conda-forge ```

 
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   local build of docs fails with OSError: [UT_PARSE] Failed to open UDUNITS-2 XML unit database 664458864

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