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  • RuntimeError: NetCDF: HDF error · 3 ✖
id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
1560055470 https://github.com/pydata/xarray/issues/4050#issuecomment-1560055470 https://api.github.com/repos/pydata/xarray/issues/4050 IC_kwDOAMm_X85c_I6u ac547 54964372 2023-05-23T20:07:28Z 2023-05-23T20:07:28Z NONE

Another cause for this issue could be an unclosed netcdf file. Specifically if you did something like:

my_file = Dataset('my_file.nc','w')

and did not close it with

my_file.close()

The ncfile is still open and the HDF library still has a lock on it.

 
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   RuntimeError: NetCDF: HDF error 615288533
660510851 https://github.com/pydata/xarray/issues/4050#issuecomment-660510851 https://api.github.com/repos/pydata/xarray/issues/4050 MDEyOklzc3VlQ29tbWVudDY2MDUxMDg1MQ== adibratul 47941638 2020-07-18T16:58:40Z 2020-07-18T16:58:40Z NONE

yes it was corrupted 

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   RuntimeError: NetCDF: HDF error 615288533
627409269 https://github.com/pydata/xarray/issues/4050#issuecomment-627409269 https://api.github.com/repos/pydata/xarray/issues/4050 MDEyOklzc3VlQ29tbWVudDYyNzQwOTI2OQ== dcherian 2448579 2020-05-12T15:15:02Z 2020-05-12T15:15:02Z MEMBER

what is s5p_file? HDF error means your file couldn't be read for one of many reasons: corrupt file for example.

 
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   RuntimeError: NetCDF: HDF error 615288533

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