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  • rabernat · 3 ✖

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  • to_zarr append with gcsmap does not work properly · 3 ✖

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id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
524898407 https://github.com/pydata/xarray/issues/3251#issuecomment-524898407 https://api.github.com/repos/pydata/xarray/issues/3251 MDEyOklzc3VlQ29tbWVudDUyNDg5ODQwNw== rabernat 1197350 2019-08-26T15:07:19Z 2019-08-26T15:07:19Z MEMBER

Thanks for looking into this Justin. We really appreciate your efforts.

Sent from my iPhone

On Aug 26, 2019, at 7:52 AM, Justin Minsk notifications@github.com wrote:

Even with the changes in gcsfs syntax the same error still occurs since the old syntax just uses get_mapper() under the hood. I can continue to work on finding which version of gcsfs works with the current xarray code but the pinning on gcsfs, xarray, and dask on conda/conda-forge ends up getting out of sync very quickly and will take me a bit more time then I thought it would.

— You are receiving this because you commented. Reply to this email directly, view it on GitHub, or mute the thread.

 
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   to_zarr append with gcsmap does not work properly  484592018
524881403 https://github.com/pydata/xarray/issues/3251#issuecomment-524881403 https://api.github.com/repos/pydata/xarray/issues/3251 MDEyOklzc3VlQ29tbWVudDUyNDg4MTQwMw== rabernat 1197350 2019-08-26T14:25:04Z 2019-08-26T14:25:04Z MEMBER

It appears that GCSFS introduced a breaking API change with no deprecation cycle. (See https://github.com/dask/gcsfs/issues/166).

The old syntax is python gcsmap = mapping.GCSMap(gcs_bucket_name) ds = xr.open_zarr(gcsmap)

The new syntax is python gcs = gcsfs.GCSFileSystem(...) map = gcs.get_mapper() ds = xr.open_zarr(map)

 
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   to_zarr append with gcsmap does not work properly  484592018
524366070 https://github.com/pydata/xarray/issues/3251#issuecomment-524366070 https://api.github.com/repos/pydata/xarray/issues/3251 MDEyOklzc3VlQ29tbWVudDUyNDM2NjA3MA== rabernat 1197350 2019-08-23T15:49:30Z 2019-08-23T15:49:30Z MEMBER

Hi @jminsk-cc - thanks for this bug report.

There have been quite a few internal changes to gcsfs recently. I'm going to tag @martindurant, who might be able to help. Could you report your gcsfs version?

Also, I can't reproduce your example because it never assigns the gcsmap variable. I assume you intended to do python gcsmap = mapping.GCSMap(gcs_bucket_name) ?

 
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   to_zarr append with gcsmap does not work properly  484592018

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