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  • naught101 · 1 ✖

issue 1

  • open_rasterio does not read coordinates from netCDF file properly with netCDF4>=1.4.2 · 1 ✖

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id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
570993776 https://github.com/pydata/xarray/issues/3185#issuecomment-570993776 https://api.github.com/repos/pydata/xarray/issues/3185 MDEyOklzc3VlQ29tbWVudDU3MDk5Mzc3Ng== naught101 167164 2020-01-06T03:54:03Z 2020-01-06T03:54:03Z NONE

I'm seeing a problem with geotiffs that I think might be related:

sh $ gdalinfo /home/nedcr/cr/software/ana/lib/geo/tests/data/Urandangi_MGA55.tif Driver: GTiff/GeoTIFF Files: /home/nedcr/cr/software/ana/lib/geo/tests/data/Urandangi_MGA55.tif /home/nedcr/cr/software/ana/lib/geo/tests/data/Urandangi_MGA55.tif.aux.xml Size is 10, 10 Coordinate System is: PROJCS["GDA94 / MGA zone 55", GEOGCS["GDA94", DATUM["Geocentric_Datum_of_Australia_1994", SPHEROID["GRS 1980",6378137,298.257222101, AUTHORITY["EPSG","7019"]], TOWGS84[0,0,0,0,0,0,0], AUTHORITY["EPSG","6283"]], PRIMEM["Greenwich",0, AUTHORITY["EPSG","8901"]], UNIT["degree",0.0174532925199433, AUTHORITY["EPSG","9122"]], AUTHORITY["EPSG","4283"]], PROJECTION["Transverse_Mercator"], PARAMETER["latitude_of_origin",0], PARAMETER["central_meridian",147], PARAMETER["scale_factor",0.9996], PARAMETER["false_easting",500000], PARAMETER["false_northing",10000000], UNIT["metre",1, AUTHORITY["EPSG","9001"]], AXIS["Easting",EAST], AXIS["Northing",NORTH], AUTHORITY["EPSG","28355"]] Origin = (-406507.954209543997422,7588834.152862589806318) Pixel Size = (263.500000000000000,-265.500000000000000) Metadata: AREA_OR_POINT=Area Image Structure Metadata: INTERLEAVE=BAND Corner Coordinates: Upper Left ( -406507.954, 7588834.153) (138d16' 6.99"E, 21d34'24.95"S) Lower Left ( -406507.954, 7586179.153) (138d16' 1.84"E, 21d35'50.30"S) Upper Right ( -403872.954, 7588834.153) (138d17'37.56"E, 21d34'29.73"S) Lower Right ( -403872.954, 7586179.153) (138d17'32.42"E, 21d35'55.09"S) Center ( -405190.454, 7587506.653) (138d16'49.70"E, 21d35'10.02"S) Band 1 Block=10x10 Type=Float32, ColorInterp=Gray Min=0.069 Max=8.066 Minimum=0.069, Maximum=8.066, Mean=2.556, StdDev=1.749 NoData Value=-3.40282306073709653e+38 Metadata: STATISTICS_MAXIMUM=8.06591796875 STATISTICS_MEAN=2.5563781395387 STATISTICS_MINIMUM=0.068740844726562 STATISTICS_STDDEV=1.7493082797107 STATISTICS_VALID_PERCENT=89

```python import xarray as xr from osgeo.gdal import Open

ras = Open('/home/nedcr/cr/software/ana/lib/geo/tests/data/Urandangi_MGA55.tif') ras.GetGeoTransform()

(-406507.954209544, 263.5, 0.0, 7588834.15286259, 0.0, -265.5)

ds = xr.open_rasterio('/home/nedcr/cr/software/ana/lib/geo/tests/data/Urandangi_MGA55.tif') ds.transform

(263.5, 0.0, -406507.954209544, 0.0, -265.5, 7588834.15286259)

```

The transform in the xarray dataset is transposed, and not really useful anymore.

Output of xr.show_versions()

INSTALLED VERSIONS ------------------ commit: None python: 3.6.8 |Anaconda, Inc.| (default, Dec 30 2018, 01:22:34) [GCC 7.3.0] python-bits: 64 OS: Linux OS-release: 5.0.0-37-lowlatency machine: x86_64 processor: x86_64 byteorder: little LC_ALL: None LANG: en_AU.UTF-8 LOCALE: en_AU.UTF-8 libhdf5: 1.10.4 libnetcdf: 4.6.2 xarray: 0.14.1 pandas: 0.25.1 numpy: 1.16.4 scipy: 1.3.0 netCDF4: 1.5.1.2 pydap: None h5netcdf: None h5py: None Nio: None zarr: None cftime: 1.0.3.4 nc_time_axis: None PseudoNetCDF: None rasterio: 1.0.22 cfgrib: None iris: None bottleneck: None dask: 1.2.0 distributed: 1.27.1 matplotlib: 3.0.3 cartopy: 0.17.0 seaborn: None numbagg: None setuptools: 40.8.0 pip: 19.0.3 conda: None pytest: 4.3.1 IPython: 7.3.0 sphinx: 2.1.2 
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   open_rasterio does not read coordinates from netCDF file properly with netCDF4>=1.4.2 477081946

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