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- Add support for cftime.datetime coordinates with coarsen · 4 ✖
id | html_url | issue_url | node_id | user | created_at | updated_at ▲ | author_association | body | reactions | performed_via_github_app | issue |
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470249595 | https://github.com/pydata/xarray/pull/2778#issuecomment-470249595 | https://api.github.com/repos/pydata/xarray/issues/2778 | MDEyOklzc3VlQ29tbWVudDQ3MDI0OTU5NQ== | fujiisoup 6815844 | 2019-03-06T19:47:39Z | 2019-03-06T19:47:39Z | MEMBER | Thanks for the follow up pr. Merging. |
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Add support for cftime.datetime coordinates with coarsen 412078232 | |
470248465 | https://github.com/pydata/xarray/pull/2778#issuecomment-470248465 | https://api.github.com/repos/pydata/xarray/issues/2778 | MDEyOklzc3VlQ29tbWVudDQ3MDI0ODQ2NQ== | jbusecke 14314623 | 2019-03-06T19:44:24Z | 2019-03-06T19:44:43Z | CONTRIBUTOR | Oh yeah, that seems totally fair to me. Thanks for clarifying. Cant wait to have this functionality! Thanks @spencerkclark |
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Add support for cftime.datetime coordinates with coarsen 412078232 | |
470240931 | https://github.com/pydata/xarray/pull/2778#issuecomment-470240931 | https://api.github.com/repos/pydata/xarray/issues/2778 | MDEyOklzc3VlQ29tbWVudDQ3MDI0MDkzMQ== | spencerkclark 6628425 | 2019-03-06T19:22:54Z | 2019-03-06T19:23:27Z | MEMBER | Oh, I should have been a little clearer!
This comment only applies to the changes regarding In [2]: import numpy as np In [3]: data = np.random.random((10, 5)) In [4]: times = xr.cftime_range('2000', periods=10) In [5]: da = xr.DataArray(data, coords={'time': times}, dims=['time', 'x']) In [6]: da = da.chunk({'time': 1, 'x': 1}) In [7]: da Out[7]: <xarray.DataArray (time: 10, x: 5)> dask.array<shape=(10, 5), dtype=float64, chunksize=(1, 1)> Coordinates: * time (time) object 2000-01-01 00:00:00 ... 2000-01-10 00:00:00 Dimensions without coordinates: x In [8]: da.coarsen(time=2).mean() Out[8]: <xarray.DataArray (time: 5, x: 5)> dask.array<shape=(5, 5), dtype=float64, chunksize=(1, 1)> Coordinates: * time (time) object 2000-01-01 12:00:00 ... 2000-01-09 12:00:00 Dimensions without coordinates: x ``` This would only come up as a possible issue if you tried to lazily take the mean of a DataArray of cftime objects, e.g.: ``` In [9]: da = xr.DataArray(times, dims=['t']).chunk() In [10]: da Out[10]: <xarray.DataArray (t: 10)> dask.array<shape=(10,), dtype=object, chunksize=(10,)> Coordinates: * t (t) object 2000-01-01 00:00:00 ... 2000-01-10 00:00:00 In [11]: da.mean()NotImplementedError Traceback (most recent call last) <ipython-input-19-c02402258881> in <module> ----> 1 da.mean() ~/xarray-dev/xarray/xarray/core/common.py in wrapped_func(self, dim, axis, skipna, kwargs) 23 kwargs): 24 return self.reduce(func, dim, axis, ---> 25 skipna=skipna, allow_lazy=True, **kwargs) 26 else: 27 def wrapped_func(self, dim=None, axis=None, # type: ignore ~/xarray-dev/xarray/xarray/core/dataarray.py in reduce(self, func, dim, axis, keep_attrs, kwargs) 1603 """ 1604 -> 1605 var = self.variable.reduce(func, dim, axis, keep_attrs, kwargs) 1606 return self._replace_maybe_drop_dims(var) 1607 ~/xarray-dev/xarray/xarray/core/variable.py in reduce(self, func, dim, axis, keep_attrs, allow_lazy, kwargs) 1366 data = func(input_data, axis=axis, kwargs) 1367 else: -> 1368 data = func(input_data, **kwargs) 1369 1370 if getattr(data, 'shape', ()) == self.shape: ~/xarray-dev/xarray/xarray/core/duck_array_ops.py in mean(array, axis, skipna, **kwargs) 348 if isinstance(array, dask_array_type): 349 raise NotImplementedError( --> 350 'Computing the mean of an array containing ' 351 'cftime.datetime objects is not yet implemented on ' 352 'dask arrays.') NotImplementedError: Computing the mean of an array containing cftime.datetime objects is not yet implemented on dask arrays. ``` but I think that's a pretty rare use case, hence why I've held off on adding that support for now. |
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Add support for cftime.datetime coordinates with coarsen 412078232 | |
470226713 | https://github.com/pydata/xarray/pull/2778#issuecomment-470226713 | https://api.github.com/repos/pydata/xarray/issues/2778 | MDEyOklzc3VlQ29tbWVudDQ3MDIyNjcxMw== | jbusecke 14314623 | 2019-03-06T18:45:16Z | 2019-03-06T18:45:16Z | CONTRIBUTOR | Oh sweet, I just encountered this problem. Would this work on a large dask array with a non-dask time dimension? |
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Add support for cftime.datetime coordinates with coarsen 412078232 |
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