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  • fujiisoup · 2 ✖

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  • IndexError when printing dataset from an Argo file · 2 ✖

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id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
346116095 https://github.com/pydata/xarray/issues/1732#issuecomment-346116095 https://api.github.com/repos/pydata/xarray/issues/1732 MDEyOklzc3VlQ29tbWVudDM0NjExNjA5NQ== fujiisoup 6815844 2017-11-21T18:21:03Z 2017-11-21T18:48:20Z MEMBER

Reproduced also in my environment.

Selected repr of your dataset is python <xarray.Dataset> Dimensions: (N_CALIB: 1, N_HISTORY: 0, N_LEVELS: 1007, N_PARAM: 3, N_PROF: 33) Dimensions without coordinates: N_CALIB, N_HISTORY, N_LEVELS, N_PARAM, N_PROF Data variables: ... SCIENTIFIC_CALIB_DATE (N_PROF, N_CALIB, N_PARAM) object b'20150514141619' ... HISTORY_INSTITUTION (N_HISTORY, N_PROF) object ... It seems the data variable in concern, such as ds['HISTORY_STEP'], is 2-dimensional but one of the dimensions N_HISTORY is size 0.

~~Currently, xarray does not handle such zero-length n-dimensional arrays. Maybe we need to drop such variables when reading?~~

EDIT: This was wrong. xarray should handle 0-size nd-array.

@shoyer, @fmaussion, any idea?

 
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   IndexError when printing dataset from an Argo file 275744315
346123261 https://github.com/pydata/xarray/issues/1732#issuecomment-346123261 https://api.github.com/repos/pydata/xarray/issues/1732 MDEyOklzc3VlQ29tbWVudDM0NjEyMzI2MQ== fujiisoup 6815844 2017-11-21T18:47:06Z 2017-11-21T18:47:06Z MEMBER

I tried with xarray v0.9.6 but it raises the same error. Maybe also related to #1719 .

 
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   IndexError when printing dataset from an Argo file 275744315

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