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  • shoyer · 3 ✖
id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
346962014 https://github.com/pydata/xarray/issues/1732#issuecomment-346962014 https://api.github.com/repos/pydata/xarray/issues/1732 MDEyOklzc3VlQ29tbWVudDM0Njk2MjAxNA== shoyer 1217238 2017-11-25T19:49:20Z 2017-11-25T19:49:20Z MEMBER

Marking this as closed since the issue will be fixed in the next netcdf4-python release. Feel free to submit a PR with a work around for xarray if using the scipy backend is not a good alternative for you.

 
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   IndexError when printing dataset from an Argo file 275744315
346170883 https://github.com/pydata/xarray/issues/1732#issuecomment-346170883 https://api.github.com/repos/pydata/xarray/issues/1732 MDEyOklzc3VlQ29tbWVudDM0NjE3MDg4Mw== shoyer 1217238 2017-11-21T21:43:45Z 2017-11-21T21:43:45Z MEMBER

This is pretty clearly a netCDF4-Python bug, which I have reported upstream: https://github.com/Unidata/netcdf4-python/issues/743

If desired, we probably could pretty easily add a work around for this behavior (e.g., to create an empty numpy array of the appropriate shape) to our netCDF4-python wrapper: https://github.com/pydata/xarray/blob/9d09c1659741dafb1fadeed49c81f9e90a548b07/xarray/backends/netCDF4_.py#L50

 
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   IndexError when printing dataset from an Argo file 275744315
346124602 https://github.com/pydata/xarray/issues/1732#issuecomment-346124602 https://api.github.com/repos/pydata/xarray/issues/1732 MDEyOklzc3VlQ29tbWVudDM0NjEyNDYwMg== shoyer 1217238 2017-11-21T18:51:41Z 2017-11-21T18:51:41Z MEMBER

This might be specific to string variables (character arrays) and netCDF4. My guess is that netCDF4 may not handle indexing on zero-dimensional arrays properly.

 
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   IndexError when printing dataset from an Argo file 275744315

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