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  • exit code 137 when using xarray.open_mfdataset · 3 ✖
id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
329181674 https://github.com/pydata/xarray/issues/1561#issuecomment-329181674 https://api.github.com/repos/pydata/xarray/issues/1561 MDEyOklzc3VlQ29tbWVudDMyOTE4MTY3NA== jamesstidard 1797906 2017-09-13T14:16:06Z 2017-09-13T14:16:06Z NONE

Increasing the chunk sizes seemed to resolve this issue. I was loading readings over time on the world as 360x180xT was tryin to rechunk them to 1x1xT.

 
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   exit code 137 when using xarray.open_mfdataset 255997962
328400296 https://github.com/pydata/xarray/issues/1561#issuecomment-328400296 https://api.github.com/repos/pydata/xarray/issues/1561 MDEyOklzc3VlQ29tbWVudDMyODQwMDI5Ng== shoyer 1217238 2017-09-11T02:33:51Z 2017-09-11T02:33:51Z MEMBER

Running out of memory seems like the most likely culprit to me, at least if you're running a recent version of xarray (we used to have some issues with insufficient locking when reading HDF5 files).

Try opening a smaller number of files to see if that gives any clues.

 
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   exit code 137 when using xarray.open_mfdataset 255997962
328191120 https://github.com/pydata/xarray/issues/1561#issuecomment-328191120 https://api.github.com/repos/pydata/xarray/issues/1561 MDEyOklzc3VlQ29tbWVudDMyODE5MTEyMA== jhamman 2443309 2017-09-08T19:17:45Z 2017-09-08T19:17:45Z MEMBER

@jamesstidard -

Can you provide something closer to a "minimum, complete, verifiable example". As it is, any number of things could be causing the problem you describe.

 
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   exit code 137 when using xarray.open_mfdataset 255997962

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