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  • Unexpected behavior with DataArray.resample(how='sum') in presence of NaNs · 3 ✖
id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
323105006 https://github.com/pydata/xarray/issues/1509#issuecomment-323105006 https://api.github.com/repos/pydata/xarray/issues/1509 MDEyOklzc3VlQ29tbWVudDMyMzEwNTAwNg== darothen 4992424 2017-08-17T15:20:22Z 2017-08-17T15:20:22Z NONE

@betaplane a re-factoring of the resample API to match pandas' is currently being wrapped up and slated for 0.10.0; see #1272

 
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   Unexpected behavior with DataArray.resample(how='sum') in presence of NaNs 250751931
322926397 https://github.com/pydata/xarray/issues/1509#issuecomment-322926397 https://api.github.com/repos/pydata/xarray/issues/1509 MDEyOklzc3VlQ29tbWVudDMyMjkyNjM5Nw== betaplane 5564291 2017-08-16T23:23:38Z 2017-08-16T23:23:38Z NONE

Ok, thanks a lot. Just as a comment though, pandas does it differently, and the xarray documentation states that "resample uses essentially the same api as resample in pandas." ``` In [1]: import numpy as np

In [2]: import pandas as pd

In [3]: x = pd.DataFrame([1, np.nan], pd.date_range('2017-08-01', '2017-08-02'))

In [4]: x.resample('D').mean() Out[4]: 0 2017-08-01 1.0 2017-08-02 NaN

In [5]: x.resample('D').sum() Out[5]: 0 2017-08-01 1.0 2017-08-02 NaN ```

 
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   Unexpected behavior with DataArray.resample(how='sum') in presence of NaNs 250751931
322894661 https://github.com/pydata/xarray/issues/1509#issuecomment-322894661 https://api.github.com/repos/pydata/xarray/issues/1509 MDEyOklzc3VlQ29tbWVudDMyMjg5NDY2MQ== jhamman 2443309 2017-08-16T20:48:16Z 2017-08-16T20:48:16Z MEMBER

1) I can reproduce this behavior on the current master branch 2) this is consistent with numpy's nansum/nanmean which we use here

```python In [1]: import numpy as np

In [2]: np.sum([np.nan]) Out[2]: nan

In [3]: np.mean([np.nan]) Out[3]: nan

In [4]: np.nansum([np.nan]) Out[4]: 0.0

In [5]: np.nanmean([np.nan]) /glade/u/home/jhamman/anaconda/envs/storylines/bin/ipython:1: RuntimeWarning: Mean of empty slice #!/glade/u/home/jhamman/anaconda/envs/storylines/bin/python Out[5]: nan ```

 
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   Unexpected behavior with DataArray.resample(how='sum') in presence of NaNs 250751931

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