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  • rasm.nc is not a valid NetCDF 3 file · 8 ✖
id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
298197040 https://github.com/pydata/xarray/issues/1113#issuecomment-298197040 https://api.github.com/repos/pydata/xarray/issues/1113 MDEyOklzc3VlQ29tbWVudDI5ODE5NzA0MA== fmaussion 10050469 2017-04-29T21:57:13Z 2017-04-29T21:57:13Z MEMBER

Note that since https://github.com/pydata/xarray-data/pull/7 , the rasm file can be read with scipy only:

ds = xr.open_dataset('.xarray_tutorial_data/rasm.nc', engine='scipy')

I guess that @chunweiyuan downloaded the file before that change.

We recommend to use conda-forge in the docs, I don't think there's much more we can do.

 
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   rasm.nc is not a valid NetCDF 3 file 188869101
298193741 https://github.com/pydata/xarray/issues/1113#issuecomment-298193741 https://api.github.com/repos/pydata/xarray/issues/1113 MDEyOklzc3VlQ29tbWVudDI5ODE5Mzc0MQ== dopplershift 221526 2017-04-29T20:49:32Z 2017-04-29T20:49:32Z CONTRIBUTOR

Anaconda netcdf4 has just been flat out broken: https://github.com/ContinuumIO/anaconda-recipes/pull/89

Not sure how that's really an xarray issue, though.

 
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   rasm.nc is not a valid NetCDF 3 file 188869101
298054723 https://github.com/pydata/xarray/issues/1113#issuecomment-298054723 https://api.github.com/repos/pydata/xarray/issues/1113 MDEyOklzc3VlQ29tbWVudDI5ODA1NDcyMw== rabernat 1197350 2017-04-28T17:12:09Z 2017-04-28T17:12:09Z MEMBER

My students / postdocs have been reporting lots of netcdf-related xarray issues recently. I think there are problems with the default anaconda distribution which we are not catching because all our tests use conda-forge.

On Apr 28, 2017, at 1:09 PM, chunweiyuan notifications@github.com wrote:

Just did. Got it to work. Muchas Gracias.

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub, or mute the thread. 

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   rasm.nc is not a valid NetCDF 3 file 188869101
298054041 https://github.com/pydata/xarray/issues/1113#issuecomment-298054041 https://api.github.com/repos/pydata/xarray/issues/1113 MDEyOklzc3VlQ29tbWVudDI5ODA1NDA0MQ== chunweiyuan 5572303 2017-04-28T17:09:09Z 2017-04-28T17:09:09Z CONTRIBUTOR

Just did. Got it to work. Muchas Gracias.

 
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   rasm.nc is not a valid NetCDF 3 file 188869101
297839131 https://github.com/pydata/xarray/issues/1113#issuecomment-297839131 https://api.github.com/repos/pydata/xarray/issues/1113 MDEyOklzc3VlQ29tbWVudDI5NzgzOTEzMQ== fmaussion 10050469 2017-04-27T21:04:59Z 2017-04-27T21:04:59Z MEMBER

Did you try the conda-forge channel to install netcdf4?

https://conda-forge.github.io/

 
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   rasm.nc is not a valid NetCDF 3 file 188869101
297835073 https://github.com/pydata/xarray/issues/1113#issuecomment-297835073 https://api.github.com/repos/pydata/xarray/issues/1113 MDEyOklzc3VlQ29tbWVudDI5NzgzNTA3Mw== chunweiyuan 5572303 2017-04-27T20:48:44Z 2017-04-27T20:48:44Z CONTRIBUTOR

When I do conda install netcdf4, it ends up downgrading my numpy from 1.12.0 to 1.11.3, which triggers other dependency-related problems in my code. Is there a different solution to this problem?

 
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   rasm.nc is not a valid NetCDF 3 file 188869101
260079474 https://github.com/pydata/xarray/issues/1113#issuecomment-260079474 https://api.github.com/repos/pydata/xarray/issues/1113 MDEyOklzc3VlQ29tbWVudDI2MDA3OTQ3NA== dokeeffe 156023 2016-11-11T23:29:25Z 2016-11-11T23:29:25Z NONE

Thanks for the fast response!! Yes that did it. All ok now. I'll close the issue.

 
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   rasm.nc is not a valid NetCDF 3 file 188869101
260075243 https://github.com/pydata/xarray/issues/1113#issuecomment-260075243 https://api.github.com/repos/pydata/xarray/issues/1113 MDEyOklzc3VlQ29tbWVudDI2MDA3NTI0Mw== fmaussion 10050469 2016-11-11T22:58:59Z 2016-11-11T22:58:59Z MEMBER

You have to install netCDF4 in order to open the rasm dataset (at least until we convert the file to netCDF3 - this might take a bit).

 
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   rasm.nc is not a valid NetCDF 3 file 188869101

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