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  • open_dataset class doesn't respond to groupstr kwarg · 6 ✖
id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
1382077317 https://github.com/pydata/xarray/issues/7256#issuecomment-1382077317 https://api.github.com/repos/pydata/xarray/issues/7256 IC_kwDOAMm_X85SYNOF TomNicholas 35968931 2023-01-13T16:19:04Z 2023-01-13T16:19:04Z MEMBER

The datatree class you mentioned is very interesting, is it yet available for me to use as a package?

Also yes you can find datatree here, though it's a bit experimental compared to the rest of xarray.

 
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   open_dataset class doesn't respond to groupstr kwarg 1435219725
1382076159 https://github.com/pydata/xarray/issues/7256#issuecomment-1382076159 https://api.github.com/repos/pydata/xarray/issues/7256 IC_kwDOAMm_X85SYM7_ TomNicholas 35968931 2023-01-13T16:18:02Z 2023-01-13T16:18:02Z MEMBER

@NilsHoebe to clarify, are you still unable to open the desired group even when you use group as the kwarg? If so a minimal example would help us to help you!

 
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   open_dataset class doesn't respond to groupstr kwarg 1435219725
1303302202 https://github.com/pydata/xarray/issues/7256#issuecomment-1303302202 https://api.github.com/repos/pydata/xarray/issues/7256 IC_kwDOAMm_X85NrtA6 mathause 10194086 2022-11-04T11:38:19Z 2022-11-04T11:38:19Z MEMBER

For context: the group / groupstrconfusion may stem from our (quite) old docs, where the type hints were not rendered nicely: https://docs.xarray.dev/en/v0.12.3/generated/xarray.open_dataset.html

 
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   open_dataset class doesn't respond to groupstr kwarg 1435219725
1302755612 https://github.com/pydata/xarray/issues/7256#issuecomment-1302755612 https://api.github.com/repos/pydata/xarray/issues/7256 IC_kwDOAMm_X85Npnkc keewis 14808389 2022-11-03T22:35:13Z 2022-11-03T22:35:38Z MEMBER

you can install it using pip install xarray-datatree (conda works, too), and my experience with it so far is good. As far as I can tell, it's still experimental, though (correct me if I'm wrong, @TomNicholas)

 
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   open_dataset class doesn't respond to groupstr kwarg 1435219725
1302700923 https://github.com/pydata/xarray/issues/7256#issuecomment-1302700923 https://api.github.com/repos/pydata/xarray/issues/7256 IC_kwDOAMm_X85NpaN7 NilsHoebe 83061207 2022-11-03T21:39:51Z 2022-11-03T21:39:51Z NONE

Grateful for your fast reply, I'm aware that the kwarg is 'group', however this neither works (some documentation refers to it as 'groupstr' thats why I mentioned it that way, I will continue with 'group'). The datatree class you mentioned is very interesting, is it yet available for me to use as a package? Anytime soon I will elaborate on my problem with some piece of code, however for now it seems like most developers are aware of the problem concerning loading nested groups in xarray.

 
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   open_dataset class doesn't respond to groupstr kwarg 1435219725
1302661719 https://github.com/pydata/xarray/issues/7256#issuecomment-1302661719 https://api.github.com/repos/pydata/xarray/issues/7256 IC_kwDOAMm_X85NpQpX keewis 14808389 2022-11-03T21:05:27Z 2022-11-03T21:05:53Z MEMBER

I'm not sure if this is a typo, but open_dataset does not / should not have have a kwarg named groupstr, it should be group (so you should get an error, if not that might be a bug?). If that's not it, could you post the code you're using to open the dataset, and also the output of xr.show_versions?

If you have multiple groups in your files, you might also be interested in datatree, which will open all groups from the file in a tree structure.

 
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   open_dataset class doesn't respond to groupstr kwarg 1435219725

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