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- Possible race condition writing to zarr store with dask distributed and region kwarg · 7 ✖
id | html_url | issue_url | node_id | user | created_at | updated_at ▲ | author_association | body | reactions | performed_via_github_app | issue |
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1100157468 | https://github.com/pydata/xarray/issues/6435#issuecomment-1100157468 | https://api.github.com/repos/pydata/xarray/issues/6435 | IC_kwDOAMm_X85BkxIc | dcherian 2448579 | 2022-04-15T14:55:43Z | 2022-04-15T14:55:43Z | MEMBER | It would help if you provided a minimal example that we could run using LocalCluster. |
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Possible race condition writing to zarr store with dask distributed and region kwarg 1191575489 | |
1099912524 | https://github.com/pydata/xarray/issues/6435#issuecomment-1099912524 | https://api.github.com/repos/pydata/xarray/issues/6435 | IC_kwDOAMm_X85Bj1VM | rodgerduffett 23694308 | 2022-04-15T07:13:33Z | 2022-04-15T07:13:33Z | NONE | Thank you for looking at this. I understand it is a tricky kind of problem! Please advise on how to fill out the issue template? When I created this I clicked 'New issue' and it popped up the edit box with '### What is your issue?' There does not seem to be more than this? |
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Possible race condition writing to zarr store with dask distributed and region kwarg 1191575489 | |
1099668258 | https://github.com/pydata/xarray/issues/6435#issuecomment-1099668258 | https://api.github.com/repos/pydata/xarray/issues/6435 | IC_kwDOAMm_X85Bi5si | max-sixty 5635139 | 2022-04-14T22:07:56Z | 2022-04-14T22:07:56Z | MEMBER | Hi @rodgerduffett — thanks for the issue. These sorts of issues can be difficult because there are so many moving pieces. Could you try reducing the size of your example a lot? Could you also fill out the issue template? Thanks |
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Possible race condition writing to zarr store with dask distributed and region kwarg 1191575489 | |
1099421876 | https://github.com/pydata/xarray/issues/6435#issuecomment-1099421876 | https://api.github.com/repos/pydata/xarray/issues/6435 | IC_kwDOAMm_X85Bh9i0 | rodgerduffett 23694308 | 2022-04-14T17:09:36Z | 2022-04-14T17:09:36Z | NONE | Updating to latest dask/zarr did not change any behaviour. dask 2022.4.0 pyhd8ed1ab_0 conda-forge dask-core 2022.4.0 pyhd8ed1ab_0 conda-forge dask-glm 0.2.0 py_1 conda-forge dask-jobqueue 0.7.3 pyhd8ed1ab_0 conda-forge dask-labextension 5.2.0 pyhd8ed1ab_0 conda-forge dask-ml 2022.1.22 pyhd8ed1ab_0 conda-forge zarr 2.11.3 pyhd8ed1ab_0 conda-forge xarray 2022.3.0 pyhd8ed1ab_0 conda-forge |
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Possible race condition writing to zarr store with dask distributed and region kwarg 1191575489 | |
1099419191 | https://github.com/pydata/xarray/issues/6435#issuecomment-1099419191 | https://api.github.com/repos/pydata/xarray/issues/6435 | IC_kwDOAMm_X85Bh843 | rodgerduffett 23694308 | 2022-04-14T17:07:31Z | 2022-04-14T17:07:31Z | NONE | Doing:
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Possible race condition writing to zarr store with dask distributed and region kwarg 1191575489 | |
1097960473 | https://github.com/pydata/xarray/issues/6435#issuecomment-1097960473 | https://api.github.com/repos/pydata/xarray/issues/6435 | IC_kwDOAMm_X85BcYwZ | rodgerduffett 23694308 | 2022-04-13T11:52:08Z | 2022-04-13T13:39:33Z | NONE | Further to this issue the zarr array created is full of holes. The holes appear at random spatial locations throughout the time dimension. From the zarr store as output to disk:
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Possible race condition writing to zarr store with dask distributed and region kwarg 1191575489 | |
1087406562 | https://github.com/pydata/xarray/issues/6435#issuecomment-1087406562 | https://api.github.com/repos/pydata/xarray/issues/6435 | IC_kwDOAMm_X85A0IHi | rodgerduffett 23694308 | 2022-04-04T10:54:26Z | 2022-04-04T10:54:26Z | NONE | dask 2022.3.0 pyhd8ed1ab_0 conda-forge dask-core 2022.3.0 pyhd8ed1ab_0 conda-forge dask-glm 0.2.0 py_1 conda-forge dask-jobqueue 0.7.3 pyhd8ed1ab_0 conda-forge dask-labextension 5.2.0 pyhd8ed1ab_0 conda-forge dask-ml 2022.1.22 pyhd8ed1ab_0 conda-forge distributed 2022.3.0 pyhd8ed1ab_0 conda-forge xarray 2022.3.0 pyhd8ed1ab_0 conda-forge |
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Possible race condition writing to zarr store with dask distributed and region kwarg 1191575489 |
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