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  • Xarray.to_netcdf encoding option not working for complevel and shuffle · 4 ✖
id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
1018098763 https://github.com/pydata/xarray/issues/6167#issuecomment-1018098763 https://api.github.com/repos/pydata/xarray/issues/6167 IC_kwDOAMm_X848rvRL chiaweh2 11950284 2022-01-21T02:12:03Z 2022-01-21T02:12:03Z NONE

@jhamman Thank you for the link! I think listing all options for encoding without explanation would already be very useful. A reference to this page or the netcdf4 page provided by @kmuehlbauer in the docstring would be very nice. I will certainly see if I can submit a PR for the document improvement if this is something the Xarray team also consider to add. Thank you again for the links and helps above from the team!

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  Xarray.to_netcdf encoding option not working for complevel and shuffle 1104213904
1017171539 https://github.com/pydata/xarray/issues/6167#issuecomment-1017171539 https://api.github.com/repos/pydata/xarray/issues/6167 IC_kwDOAMm_X848oM5T jhamman 2443309 2022-01-20T06:53:37Z 2022-01-20T06:53:37Z MEMBER

@chiaweh2 - a PR to improve the documentation would certainly be welcome. Do you think it makes sense to add this to the docstring or to the user guide page on IO (https://xarray.pydata.org/en/stable/user-guide/io.html#chunk-based-compression)?

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  Xarray.to_netcdf encoding option not working for complevel and shuffle 1104213904
1013688441 https://github.com/pydata/xarray/issues/6167#issuecomment-1013688441 https://api.github.com/repos/pydata/xarray/issues/6167 IC_kwDOAMm_X848a6h5 chiaweh2 11950284 2022-01-15T14:08:04Z 2022-01-15T14:09:10Z NONE

@kmuehlbauer @mathause Sorry for reporting this as bug and thank you so much for the explanation and help changing the tag! After changing the zlib=True, it works perfectly now.

Is there a possibility of including the link or adding a brief explanation of all encoding options in https://xarray.pydata.org/en/stable/generated/xarray.Dataset.to_netcdf.html ? I think this would be most helpful! However, I understand if the team consider this as a backend related setting and would not want to put too much info on the Xarray docstring.

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  Xarray.to_netcdf encoding option not working for complevel and shuffle 1104213904
1013613766 https://github.com/pydata/xarray/issues/6167#issuecomment-1013613766 https://api.github.com/repos/pydata/xarray/issues/6167 IC_kwDOAMm_X848aoTG kmuehlbauer 5821660 2022-01-15T05:08:09Z 2022-01-15T05:08:09Z MEMBER

@chiaweh2 This only works if you set zlib=True. The two keywords are ignored if zlib=False. Please refer to the netcdf4-python docs https://unidata.github.io/netcdf4-python/#Dataset.createVariable.

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  Xarray.to_netcdf encoding option not working for complevel and shuffle 1104213904

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