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  • dcherian · 4 ✖

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  • Feature Request: Hierarchical storage and processing in xarray · 4 ✖

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  • MEMBER · 4 ✖
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846137752 https://github.com/pydata/xarray/issues/4118#issuecomment-846137752 https://api.github.com/repos/pydata/xarray/issues/4118 MDEyOklzc3VlQ29tbWVudDg0NjEzNzc1Mg== dcherian 2448579 2021-05-21T17:58:38Z 2021-05-21T17:58:38Z MEMBER 
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   Feature Request: Hierarchical storage and processing in xarray 628719058
806954634 https://github.com/pydata/xarray/issues/4118#issuecomment-806954634 https://api.github.com/repos/pydata/xarray/issues/4118 MDEyOklzc3VlQ29tbWVudDgwNjk1NDYzNA== dcherian 2448579 2021-03-25T15:30:53Z 2021-03-25T15:30:53Z MEMBER

I can shoulder part of the load and help is definitely needed. LOI is due on Tuesday. I'll take a stab this evening and post a link.

 
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   Feature Request: Hierarchical storage and processing in xarray 628719058
801257666 https://github.com/pydata/xarray/issues/4118#issuecomment-801257666 https://api.github.com/repos/pydata/xarray/issues/4118 MDEyOklzc3VlQ29tbWVudDgwMTI1NzY2Ng== dcherian 2448579 2021-03-17T17:10:41Z 2021-03-17T17:10:41Z MEMBER

But did we decide who might serve as PI for such a proposal?

No.

@emilbiju are you interested in open-sourcing your work?

 
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   Feature Request: Hierarchical storage and processing in xarray 628719058
637660689 https://github.com/pydata/xarray/issues/4118#issuecomment-637660689 https://api.github.com/repos/pydata/xarray/issues/4118 MDEyOklzc3VlQ29tbWVudDYzNzY2MDY4OQ== dcherian 2448579 2020-06-02T16:20:09Z 2020-06-02T16:20:09Z MEMBER

Thanks for writing this up @emilbiju . These are very interesting ideas

  1. The nice thing about using NetCDF groups (or HDF5?) is that it is a standard and your data files are readable using other software.

  2. So far, xarray has been reluctant to add "groups" or this kind of hierarchical organization because of all the additional complexity involved (#1092)

  3. That said, there is definitely interest in a package that provides a high-level object composed of multiple xarray datasets (again #1092). So I encourage you to post your code online so others can try it out and iterate.

    a. For example, our friends over at Arviz have a InferenceData structure composed of multiple Datasets that is represented on-disk using NetCDF groups: https://arviz-devs.github.io/arviz/notebooks/XarrayforArviZ.html

 
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   Feature Request: Hierarchical storage and processing in xarray 628719058

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