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- to_netcdf() fails to append to an existing file · 5 ✖
id | html_url | issue_url | node_id | user | created_at | updated_at ▲ | author_association | body | reactions | performed_via_github_app | issue |
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336224586 | https://github.com/pydata/xarray/issues/1215#issuecomment-336224586 | https://api.github.com/repos/pydata/xarray/issues/1215 | MDEyOklzc3VlQ29tbWVudDMzNjIyNDU4Ng== | shoyer 1217238 | 2017-10-12T18:25:46Z | 2017-10-12T18:25:46Z | MEMBER |
Yes, |
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to_netcdf() fails to append to an existing file 201428093 | |
336213748 | https://github.com/pydata/xarray/issues/1215#issuecomment-336213748 | https://api.github.com/repos/pydata/xarray/issues/1215 | MDEyOklzc3VlQ29tbWVudDMzNjIxMzc0OA== | shoyer 1217238 | 2017-10-12T17:46:42Z | 2017-10-12T17:46:42Z | MEMBER |
No, it is not. This issue is about appending new variables to an existing netCDF file. I think what you are looking for is to append along existing dimensions to a netCDF file. This is possible in the netCDF data model, but not yet supported by xarray. See https://github.com/pydata/xarray/issues/1398 for some discussion. For these types of use cases, I would generally recommend writing a new netCDF file, and then loading everything afterwards using |
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to_netcdf() fails to append to an existing file 201428093 | |
334269106 | https://github.com/pydata/xarray/issues/1215#issuecomment-334269106 | https://api.github.com/repos/pydata/xarray/issues/1215 | MDEyOklzc3VlQ29tbWVudDMzNDI2OTEwNg== | shoyer 1217238 | 2017-10-04T19:48:21Z | 2017-10-04T19:48:21Z | MEMBER | +1, we probably don't want to read coordinates back from disk On Wed, Oct 4, 2017 at 12:09 PM Fabien Maussion notifications@github.com wrote:
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to_netcdf() fails to append to an existing file 201428093 | |
274296715 | https://github.com/pydata/xarray/issues/1215#issuecomment-274296715 | https://api.github.com/repos/pydata/xarray/issues/1215 | MDEyOklzc3VlQ29tbWVudDI3NDI5NjcxNQ== | shoyer 1217238 | 2017-01-22T00:01:12Z | 2017-01-22T00:01:12Z | MEMBER | OK, I understand what's going on now. Previously, we had a hack that disabled writing variables along dimensions of the form So although your example worked in v0.8.2, this small variation did not, because we call ds = xr.Dataset() ds['dim'] = ('dim', [1, 2, 3]) ds['var2'] = ('dim', [10, 11, 12]) ds.to_netcdf(path, 'a') ``` I find it reassuring that this only worked in limited cases before, so it unlikely that many users are depending on this functionality. It would be nice if My main concern with squeezing this in is that the proper behavior is not entirely clear and will need to go through some review:
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to_netcdf() fails to append to an existing file 201428093 | |
273681045 | https://github.com/pydata/xarray/issues/1215#issuecomment-273681045 | https://api.github.com/repos/pydata/xarray/issues/1215 | MDEyOklzc3VlQ29tbWVudDI3MzY4MTA0NQ== | shoyer 1217238 | 2017-01-19T04:45:01Z | 2017-01-19T04:45:01Z | MEMBER | Good catch! Marking this as a bug. |
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to_netcdf() fails to append to an existing file 201428093 |
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