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  • xarray to and from iris · 16 ✖

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355011878 https://github.com/pydata/xarray/pull/814#issuecomment-355011878 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDM1NTAxMTg3OA== fmaussion 10050469 2018-01-03T13:30:25Z 2018-01-03T13:30:25Z MEMBER

Indeed. Thanks to all people involved!

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  xarray to and from iris 145140657
348357025 https://github.com/pydata/xarray/pull/814#issuecomment-348357025 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDM0ODM1NzAyNQ== shoyer 1217238 2017-11-30T23:41:55Z 2017-11-30T23:41:55Z MEMBER

I think either way works. Probably easiest to fork this branch and then merge in the latest from master. On Thu, Nov 30, 2017 at 3:38 PM Neil Parley notifications@github.com wrote:

I think also I could make you a contributor or transfer the branch to someone. So that might be an option too.

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub https://github.com/pydata/xarray/pull/814#issuecomment-348225565, or mute the thread https://github.com/notifications/unsubscribe-auth/ABKS1oT1qWWy-o5CJe6Y45Y-DsGhjTucks5s7swSgaJpZM4H9jGH .

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309810114 https://github.com/pydata/xarray/pull/814#issuecomment-309810114 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDMwOTgxMDExNA== shoyer 1217238 2017-06-20T16:14:36Z 2017-06-20T16:14:36Z MEMBER

No worries! The great thing about GitHub is that it's pretty easy for someone else to pick up your work :)

On Tue, Jun 20, 2017 at 12:25 AM, Neil Parley notifications@github.com wrote:

Sorry guys I don't have time to do anything on this (or any open source stuff) at the moment.

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  xarray to and from iris 145140657
309485895 https://github.com/pydata/xarray/pull/814#issuecomment-309485895 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDMwOTQ4NTg5NQ== shoyer 1217238 2017-06-19T16:02:00Z 2017-06-19T16:02:00Z MEMBER

Yes, we would still love to get this in, though it might need a few other changes to work now. Could you open a new PR with the tests added back in? (Assuming Neil is not interested in picking this back up)

On Mon, Jun 19, 2017 at 8:58 AM, DWesl notifications@github.com wrote:

If you're still looking for the old tests, it looks like they disappeared in the last merge commit, f48de5 https://github.com/pydata/xarray/pull/814/commits/f48de5a3ea916b80a7bfc070c3c1c3549e931189#diff-48ab4ba033ad06981f566a2e2f561f5aL1819 .

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262372139 https://github.com/pydata/xarray/pull/814#issuecomment-262372139 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDI2MjM3MjEzOQ== shoyer 1217238 2016-11-22T21:32:57Z 2016-11-22T21:32:57Z MEMBER

This is looking pretty comprehensive to me. Could maybe do with a couple of tests perhaps, but otherwise :+1: .

Indeed, merging this is really just blocked on tests right now. We need at least something so we can verify that this basically works.

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228608416 https://github.com/pydata/xarray/pull/814#issuecomment-228608416 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDIyODYwODQxNg== shoyer 1217238 2016-06-26T16:04:11Z 2016-06-26T16:04:11Z MEMBER

No worries, no rush here from my end :). On Sun, Jun 26, 2016 at 1:35 PM Neil Parley notifications@github.com wrote:

@shoyer https://github.com/shoyer I have not forgotten about this PR, I just been working a lot on a pandas PR updating the ci and it's been taking up a lot of my spare time.

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228414378 https://github.com/pydata/xarray/pull/814#issuecomment-228414378 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDIyODQxNDM3OA== shoyer 1217238 2016-06-24T17:51:42Z 2016-06-24T17:51:42Z MEMBER

@pelson @rhattersley any tips on handling the edge cases of cubes with some, but not all missing dim_coords?

@nparley I would hate for this to get lost. I'm OK merging this before it covers every edge case -- let's just document the limitations and leave that for later cleanup.

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221758131 https://github.com/pydata/xarray/pull/814#issuecomment-221758131 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDIyMTc1ODEzMQ== shoyer 1217238 2016-05-26T01:58:38Z 2016-05-26T01:58:38Z MEMBER

OK, I was not paying attention here with #860 -- I assumed that the build problem was with the build including Iris, but it was actually the other build that started spontaneously failing.

I'm afraid I already merged that PR, so could you please try rebasing again? Sorry for the hassle! On the plus side, I think using conda-forge will ultimately work better than using all the separate channels.

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  xarray to and from iris 145140657
221629657 https://github.com/pydata/xarray/pull/814#issuecomment-221629657 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDIyMTYyOTY1Nw== shoyer 1217238 2016-05-25T16:24:14Z 2016-05-25T16:24:14Z MEMBER

@nparley Let's see if https://github.com/pydata/xarray/pull/860 works. I think that will probably solve the CI issue (at least on Travis-CI).

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219908364 https://github.com/pydata/xarray/pull/814#issuecomment-219908364 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDIxOTkwODM2NA== shoyer 1217238 2016-05-18T02:23:45Z 2016-05-18T02:23:45Z MEMBER

@rhattersley I think this function is cleaner without the cf_var_name argument, so I would probably remove it. That said, I usually try to avoid issuing warnings at all.

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  xarray to and from iris 145140657
218525434 https://github.com/pydata/xarray/pull/814#issuecomment-218525434 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDIxODUyNTQzNA== shoyer 1217238 2016-05-11T17:09:39Z 2016-05-11T17:09:39Z MEMBER

@jhamman and I have a few minor suggestions, but otherwise this looks good!

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  xarray to and from iris 145140657
218357035 https://github.com/pydata/xarray/pull/814#issuecomment-218357035 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDIxODM1NzAzNQ== jhamman 2443309 2016-05-11T04:10:40Z 2016-05-11T04:10:40Z MEMBER

This PR needs "what's new" and "api" entries in the docs.

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  xarray to and from iris 145140657
205368702 https://github.com/pydata/xarray/pull/814#issuecomment-205368702 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDIwNTM2ODcwMg== shoyer 1217238 2016-04-04T16:04:26Z 2016-04-04T16:04:26Z MEMBER

One other thing that I noticed from the latest example -- it would be nice to covert cell methods from Cubes into string attributes on DataArrays.

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  xarray to and from iris 145140657
205368137 https://github.com/pydata/xarray/pull/814#issuecomment-205368137 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDIwNTM2ODEzNw== shoyer 1217238 2016-04-04T16:02:38Z 2016-04-04T16:02:38Z MEMBER

Is there any way to know for sure whether a coordinate has been automatically created? Or is the name the only clue?

I'm afraid the name is the only clue. My inclination would be not to do anything special here to "un-name" default coordinates, assuming Iris has a straightforward way to get rid of them. Dimensions like dim0 come up quickly in demo code but rarely in practice -- it's mostly a signal to the user that the should pick a meaningful name.

If this is the way to do things then does this comment need deleting?

Yes, that comment is out of date. I'm currently refactoring that code though, so let me take care care of it.

There's a separate argument about whether or not xarray should automatically convert cubes when passed into the xarray.DataArray constructor. We do this for pandas objects, but not any other labelled array types, currently.

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  xarray to and from iris 145140657
204802488 https://github.com/pydata/xarray/pull/814#issuecomment-204802488 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDIwNDgwMjQ4OA== shoyer 1217238 2016-04-02T20:41:21Z 2016-04-02T20:41:21Z MEMBER

There's no good solution for representing bounds in xarray -- we can put these as coordinates on Dataset objects, but they aren't supported on DataArray objects. I had some plans to add an IntervalIndex type to pandas (https://github.com/pydata/pandas/pull/8707) which would let us support bounds, but honestly I'm not sure if/when I'll finish that.

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  xarray to and from iris 145140657
204617927 https://github.com/pydata/xarray/pull/814#issuecomment-204617927 https://api.github.com/repos/pydata/xarray/issues/814 MDEyOklzc3VlQ29tbWVudDIwNDYxNzkyNw== shoyer 1217238 2016-04-02T00:37:47Z 2016-04-02T00:38:31Z MEMBER

This is awesome!

Let's try to add some documentation -- at least a mention in What's New.

CC @pelson

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  xarray to and from iris 145140657

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