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  • pandas.errors.InvalidIndexError is raised in some runs when using chunks and map_blocks() · 2 ✖

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id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
1220722282 https://github.com/pydata/xarray/issues/6816#issuecomment-1220722282 https://api.github.com/repos/pydata/xarray/issues/6816 IC_kwDOAMm_X85Iwr5q dcherian 2448579 2022-08-19T14:06:09Z 2022-08-19T14:06:09Z MEMBER

Thanks, please reopen if you can construct a reproducible example.

 
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   pandas.errors.InvalidIndexError is raised in some runs when using chunks and map_blocks() 1315111684
1192699113 https://github.com/pydata/xarray/issues/6816#issuecomment-1192699113 https://api.github.com/repos/pydata/xarray/issues/6816 IC_kwDOAMm_X85HFyTp jhamman 2443309 2022-07-22T15:37:04Z 2022-07-22T15:37:04Z MEMBER

Hi @lumbric - thanks for the report. Though its often challenging when coming from complicated workflows, getting to a MCVE is really the only way to sort out what is going wrong here.

A few suggestions that will hopefully help you get there:

  • Try running your calculation using the synchronous dask scheduler. Dask's graph execution order is not always deterministic so sometimes leads to the conclusion that errors are not reproducible.
  • Try reconstructing a similar workflow with dummy data.

FWIW, the error you are getting tells me that you have an Index/Coordinate with duplicate values in it. Are you sure that is not possible?

 
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   pandas.errors.InvalidIndexError is raised in some runs when using chunks and map_blocks() 1315111684

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