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  • huard · 4 ✖

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  • interp with long cftime coordinates raises an error · 4 ✖

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  • CONTRIBUTOR · 4 ✖
id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
567129939 https://github.com/pydata/xarray/issues/3641#issuecomment-567129939 https://api.github.com/repos/pydata/xarray/issues/3641 MDEyOklzc3VlQ29tbWVudDU2NzEyOTkzOQ== huard 81219 2019-12-18T17:22:55Z 2019-12-18T17:22:55Z CONTRIBUTOR

Note that at the moment, if we pass np.datetime64 objects that exceed the allowed time span, the function yields garbage without failing. Is this something we want to fix as well ?

One option is to convert array and offset to microseconds first, then compute the delta, but this may break people's code.

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  interp with long cftime coordinates raises an error 539648897
567077543 https://github.com/pydata/xarray/issues/3641#issuecomment-567077543 https://api.github.com/repos/pydata/xarray/issues/3641 MDEyOklzc3VlQ29tbWVudDU2NzA3NzU0Mw== huard 81219 2019-12-18T15:22:07Z 2019-12-18T15:22:07Z CONTRIBUTOR

How about replacing array = np.asarray(pd.Series(array.ravel())).reshape(array.shape) by array = array.astype("timedelta64") ? with numpy 1.17 your example works and the test suite only fails on unrelated netcdf string errors.

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  interp with long cftime coordinates raises an error 539648897
567022752 https://github.com/pydata/xarray/issues/3641#issuecomment-567022752 https://api.github.com/repos/pydata/xarray/issues/3641 MDEyOklzc3VlQ29tbWVudDU2NzAyMjc1Mg== huard 81219 2019-12-18T13:04:31Z 2019-12-18T13:04:31Z CONTRIBUTOR

Got it, thanks !

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  interp with long cftime coordinates raises an error 539648897
567018062 https://github.com/pydata/xarray/issues/3641#issuecomment-567018062 https://api.github.com/repos/pydata/xarray/issues/3641 MDEyOklzc3VlQ29tbWVudDU2NzAxODA2Mg== huard 81219 2019-12-18T12:49:43Z 2019-12-18T12:49:43Z CONTRIBUTOR

Another issue with datetime_to_numeric happens with: import xarray as xr import cftime i = xr.CFTimeIndex(xr.cftime_range('2000-01-01', periods=2)) xr.core.duck_array_ops.datetime_to_numeric(i, cftime.DatetimeGregorian(2, 1, 1), datetime_unit='D')

```python

TypeError Traceback (most recent call last) pandas/_libs/tslibs/timedeltas.pyx in pandas._libs.tslibs.timedeltas.array_to_timedelta64()

pandas/_libs/tslibs/timedeltas.pyx in pandas._libs.tslibs.timedeltas.parse_timedelta_string()

TypeError: object of type 'datetime.timedelta' has no len()

During handling of the above exception, another exception occurred:

OverflowError Traceback (most recent call last) <ipython-input-50-b03d9c4f220d> in <module> ----> 1 xr.core.duck_array_ops.datetime_to_numeric(i, cftime.DatetimeGregorian(2, 1, 1), datetime_unit='D')

~/src/xarray/xarray/core/duck_array_ops.py in datetime_to_numeric(array, offset, datetime_unit, dtype) 395 else: 396 offset = min(array) --> 397 array = array - offset 398 399 if not hasattr(array, "dtype"): # scalar is converted to 0d-array

~/src/xarray/xarray/coding/cftimeindex.py in sub(self, other) 431 432 if isinstance(other, (CFTimeIndex, cftime.datetime)): --> 433 return pd.TimedeltaIndex(np.array(self) - np.array(other)) 434 elif isinstance(other, pd.TimedeltaIndex): 435 return CFTimeIndex(np.array(self) - other.to_pytimedelta())

~/.conda/envs/xclim3/lib/python3.6/site-packages/pandas/core/indexes/timedeltas.py in new(cls, data, unit, freq, start, end, periods, closed, dtype, copy, name, verify_integrity) 256 257 tdarr = TimedeltaArray._from_sequence( --> 258 data, freq=freq, unit=unit, dtype=dtype, copy=copy 259 ) 260 return cls._simple_new(tdarr._data, freq=tdarr.freq, name=name)

~/.conda/envs/xclim3/lib/python3.6/site-packages/pandas/core/arrays/timedeltas.py in _from_sequence(cls, data, dtype, copy, freq, unit) 270 freq, freq_infer = dtl.maybe_infer_freq(freq) 271 --> 272 data, inferred_freq = sequence_to_td64ns(data, copy=copy, unit=unit) 273 freq, freq_infer = dtl.validate_inferred_freq(freq, inferred_freq, freq_infer) 274

~/.conda/envs/xclim3/lib/python3.6/site-packages/pandas/core/arrays/timedeltas.py in sequence_to_td64ns(data, copy, unit, errors) 971 if is_object_dtype(data.dtype) or is_string_dtype(data.dtype): 972 # no need to make a copy, need to convert if string-dtyped --> 973 data = objects_to_td64ns(data, unit=unit, errors=errors) 974 copy = False 975

~/.conda/envs/xclim3/lib/python3.6/site-packages/pandas/core/arrays/timedeltas.py in objects_to_td64ns(data, unit, errors) 1096 values = np.array(data, dtype=np.object_, copy=False) 1097 -> 1098 result = array_to_timedelta64(values, unit=unit, errors=errors) 1099 return result.view("timedelta64[ns]") 1100

pandas/_libs/tslibs/timedeltas.pyx in pandas._libs.tslibs.timedeltas.array_to_timedelta64()

pandas/_libs/tslibs/timedeltas.pyx in pandas._libs.tslibs.timedeltas.convert_to_timedelta64()

pandas/_libs/tslibs/timedeltas.pyx in pandas._libs.tslibs.timedeltas.delta_to_nanoseconds()

OverflowError: Python int too large to convert to C long ```

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  interp with long cftime coordinates raises an error 539648897

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