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  • vnoel · 3 ✖

issue 1

  • Fixes OS error arising from too many files open · 3 ✖

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  • CONTRIBUTOR · 3 ✖
id html_url issue_url node_id user created_at updated_at ▲ author_association body reactions performed_via_github_app issue
287099757 https://github.com/pydata/xarray/pull/1198#issuecomment-287099757 https://api.github.com/repos/pydata/xarray/issues/1198 MDEyOklzc3VlQ29tbWVudDI4NzA5OTc1Nw== vnoel 731499 2017-03-16T15:46:14Z 2017-03-16T15:46:14Z CONTRIBUTOR

with that keyword the open_mfdataset goes through ! my code crashes later because the data is too big to fit in memory, but that's another problem ;-)

 
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   Fixes OS error arising from too many files open 199900056
287058651 https://github.com/pydata/xarray/pull/1198#issuecomment-287058651 https://api.github.com/repos/pydata/xarray/issues/1198 MDEyOklzc3VlQ29tbWVudDI4NzA1ODY1MQ== vnoel 731499 2017-03-16T13:37:05Z 2017-03-16T13:37:05Z CONTRIBUTOR

Hey @pwolfram, I installed your branch and tried to open_mfdataset on 1474 hdf5 files.

I got the following: File "/users/noel/.conda/envs/python3/lib/python3.6/site-packages/xarray/backends/api.py", line 524, in open_mfdataset File "/users/noel/.conda/envs/python3/lib/python3.6/site-packages/xarray/backends/api.py", line 524, in <listcomp> File "/users/noel/.conda/envs/python3/lib/python3.6/site-packages/xarray/backends/api.py", line 299, in open_dataset File "/users/noel/.conda/envs/python3/lib/python3.6/site-packages/xarray/backends/netCDF4_.py", line 203, in __init__ File "/users/noel/.conda/envs/python3/lib/python3.6/site-packages/xarray/backends/netCDF4_.py", line 178, in _open_netcdf4_group File "netCDF4/_netCDF4.pyx", line 1848, in netCDF4._netCDF4.Dataset.__init__ (netCDF4/_netCDF4.c:13992) OSError: Too many open files

 
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   Fixes OS error arising from too many files open 199900056
277276242 https://github.com/pydata/xarray/pull/1198#issuecomment-277276242 https://api.github.com/repos/pydata/xarray/issues/1198 MDEyOklzc3VlQ29tbWVudDI3NzI3NjI0Mg== vnoel 731499 2017-02-03T15:27:04Z 2017-02-03T15:27:04Z CONTRIBUTOR

I'm just chiming in to signify my interest in seeing this issue solved. I have just hit "OSError: Too many open files". The data itself is not even huge, but it's scattered across many files and it's a PITA to revert to manual concatenation -- I've grown used to dask doing the work for me ;-)

 
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   Fixes OS error arising from too many files open 199900056

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