issue_comments: 392217441
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| html_url | issue_url | id | node_id | user | created_at | updated_at | author_association | body | reactions | performed_via_github_app | issue |
|---|---|---|---|---|---|---|---|---|---|---|---|
| https://github.com/pydata/xarray/issues/2186#issuecomment-392217441 | https://api.github.com/repos/pydata/xarray/issues/2186 | 392217441 | MDEyOklzc3VlQ29tbWVudDM5MjIxNzQ0MQ== | 12929327 | 2018-05-26T00:03:59Z | 2018-05-26T00:03:59Z | NONE | I'm now wondering if this issue is in dask land, based on this issue: https://github.com/dask/dask/issues/3247 It has been suggested in other places to get around the memory accumulation by running each loop iteration in a forked process: ```python def worker(ds, k): print('accessing data') data = ds.datavar[k,:,:].values print('data acquired') for k in range(ds.dims['t']): p = multiprocessing.Process(target=worker, args=(ds, k)) p.start() p.join() ``` But apparently one can't access dask-wrapped xarray datasets in subprocesses without a deadlock. I don't know enough about the internals to understand why. |
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