html_url,issue_url,id,node_id,user,created_at,updated_at,author_association,body,reactions,performed_via_github_app,issue
https://github.com/pydata/xarray/issues/5150#issuecomment-822370759,https://api.github.com/repos/pydata/xarray/issues/5150,822370759,MDEyOklzc3VlQ29tbWVudDgyMjM3MDc1OQ==,7522920,2021-04-19T10:44:38Z,2021-04-19T10:44:38Z,NONE,"Ok, PEBKAC (problem exists between keyboard and chair). Your hints already pointed in the correct direction, I had a testscript in my homedir which was named cfgrib.py, a very unfortunate naming, I'd say... Issue can be closed, everything is working fine. And many thanks for your efforts. Olaf","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",,856915051
https://github.com/pydata/xarray/issues/5150#issuecomment-820537456,https://api.github.com/repos/pydata/xarray/issues/5150,820537456,MDEyOklzc3VlQ29tbWVudDgyMDUzNzQ1Ng==,14808389,2021-04-15T15:50:48Z,2021-04-16T10:31:15Z,MEMBER,"did you try `mamba` or `conda` from `miniconda`?
Edit: also, did you make sure to activate the new environment (check `$PYTHONPATH` and `which python`) and that you are not in a directory containing the code of `xarray` or `cfgrib`?","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",,856915051
https://github.com/pydata/xarray/issues/5150#issuecomment-821080971,https://api.github.com/repos/pydata/xarray/issues/5150,821080971,MDEyOklzc3VlQ29tbWVudDgyMTA4MDk3MQ==,7522920,2021-04-16T10:29:13Z,2021-04-16T10:29:13Z,NONE,"Hi,
keewis wrote on 15.04.21 17:51:
> did you try |mamba| or |conda| from |miniconda|?
right now I only did miniforge (though our elder
python environments are anaconda or conda). And:
Yes, the env was activated and no other xarray
or cfgrib stuff around here. :-)
When I create a complete new miniforge3-4.9.2-3
on our system and only do a
conda install eccodes
conda install cfgrib
the thing works. So there must be some relicts
from earlier package installs or some other
versions that cause the trouble. I got some
hints from a different site that it might even
be dependent on the order in which things are
installed, not sure about that. Still I wonder
that the error message seems to imply that
there might be a circular import...
I'll do some further testing and will come
back when I have something that is more
concrete so that you can look at it.
Thanks, Olaf
--
Dipl. Inform. Olaf Gellert email ***@***.***
Deutsches Klimarechenzentrum GmbH phone +49 (0)40 460094 214
Bundesstrasse 45a fax +49 (0)40 460094 270
D-20146 Hamburg, Germany www http://www.dkrz.de
Sitz der Gesellschaft: Hamburg
Geschäftsführer: Prof. Dr. Thomas Ludwig
Registergericht: Amtsgericht Hamburg, HRB 39784
","{""total_count"": 1, ""+1"": 1, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",,856915051
https://github.com/pydata/xarray/issues/5150#issuecomment-820534189,https://api.github.com/repos/pydata/xarray/issues/5150,820534189,MDEyOklzc3VlQ29tbWVudDgyMDUzNDE4OQ==,7522920,2021-04-15T15:46:16Z,2021-04-15T15:46:16Z,NONE,"Strange. I deployed a completely new conda (using the miniforge installer Miniforge3-4.9.2-3-Linux-x86_64.sh). With that I created an environment ""test"" with your yml file. When I run the xr.tutorial.open_dataset (exact copy-paste from your message), I get the same error as usual:
AttributeError: partially initialized module 'cfgrib' has no attribute 'open_file' (most likely due to a circular import
What the heck can be the problem that I face? I am bemused...
","{""total_count"": 0, ""+1"": 0, ""-1"": 0, ""laugh"": 0, ""hooray"": 0, ""confused"": 0, ""heart"": 0, ""rocket"": 0, ""eyes"": 0}",,856915051
https://github.com/pydata/xarray/issues/5150#issuecomment-820513082,https://api.github.com/repos/pydata/xarray/issues/5150,820513082,MDEyOklzc3VlQ29tbWVudDgyMDUxMzA4Mg==,14808389,2021-04-15T15:19:25Z,2021-04-15T15:19:25Z,MEMBER,"strange. This seems like a environment issue. Could you try creating a environment with `conda env create -f env.yml`?
contents of env.yml
```
name: test
channels:
- conda-forge
dependencies:
- python=3.8.6
- xarray=0.16.2
- pandas=1.2.1
- numpy=1.19.2
- scipy=1.6.0
- netCDF4=1.5.5.1
- h5py=2.10.0
- zarr=2.6.1
- cftime=1.3.1
- nc-time-axis=1.2.0
- iris=2.4.0
- bottleneck=1.3.2
- dask=2021.01.0
- distributed=2021.01.0
- matplotlib=3.3.3
- cartopy=0.18.0
- seaborn=0.11.1
- setuptools=49.6.0
- pip=20.3.1
- conda=4.9.2
- pytest=6.2.1
- ipython=7.19.0
- sphinx=3.4.3
- libnetcdf=4.7.4
- cfgrib=0.9.9.0
- h5netcdf=0.8.1
```
output of xr.show_versions()
```
INSTALLED VERSIONS
------------------
commit: None
python: 3.8.8 | packaged by conda-forge | (default, Feb 20 2021, 16:22:27)
[GCC 9.3.0]
python-bits: 64
OS: Linux
OS-release: 4.19.0-16-amd64
machine: x86_64
processor:
byteorder: little
libhdf5: None
libnetcdf: None
xarray: 0.16.2
pandas: 1.2.4
numpy: 1.20.2
scipy: None
netCDF4: None
pydap: None
h5netcdf: None
h5py: None
Nio: None
zarr: None
cftime: None
nc_time_axis: None
PseudoNetCDF: None
rasterio: None
cfgrib: 0.9.9.0
iris: None
bottleneck: None
dask: None
distributed: None
matplotlib: None
cartopy: None
seaborn: None
numbagg: None
pint: None
setuptools: 49.6.0.post20210108
pip: 21.0.1
conda: 4.10.1
pytest: None
IPython: 7.22.0
sphinx: None
```